Gene: AT1G68840
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G68840
- Transcript Identifier AT1G68840.2
- Gene Type Coding gene
- Location Chr1 : 25880442-25881500 : positive
Gene Family Information
- ID HOM05D000466
- #Genes/#Species 1131/96
- Phylogenetic origin
- ID ORTHO05D000331
- #Genes/#Species 1099/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G68840.2
- symbol RAV2
- Alias AtRAV2,EDF2,ETHYLENE RESPONSE DNA BINDING FACTOR 2,RAP2.8,RELATED TO AP2 8,TEM2,TEMPRANILLO 2
- uniprot P82280
Descriptions
- Description related to ABI3/VP1 2
- Computational description related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1); Has 6747 Blast hits to 6417 proteins in 277 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6717; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
- Computational description related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045892 | IDA | Gene Ontology | negative regulation of transcription, DNA-templated | 1 |
| GO:0071456 | HEP | Gene Ontology | cellular response to hypoxia | 2 |
| GO:0009873 | IEA | GOA Database | ethylene-activated signaling pathway | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 3 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 5 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | TAS | Gene Ontology | DNA binding | 6 |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |