Gene: AT1G53730
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G53730
- Transcript Identifier AT1G53730.2
- Gene Type Coding gene
- Location Chr1 : 20061771-20065475 : positive
Gene Family Information
- ID HOM05D000570
- #Genes/#Species 970/96
- Phylogenetic origin
- ID ORTHO05D001174
- #Genes/#Species 466/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G53730.2
- symbol SRF6
- uniprot Q9C8M9
Descriptions
- Description STRUBBELIG-receptor family 6
- Computational description STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158312 Blast hits to 119064 proteins in 3476 species: Archae - 117; Bacteria - 16807; Metazoa - 46536; Fungi - 8480; Plants - 68549; Viruses - 305; Other Eukaryotes - 17518 (source: NCBI BLink).
- Computational description STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158289 Blast hits to 119426 proteins in 3465 species: Archae - 133; Bacteria - 16895; Metazoa - 46669; Fungi - 8281; Plants - 68201; Viruses - 301; Other Eukaryotes - 17809 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006468 | IBA IEA | Gene Ontology | protein phosphorylation | 1 |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004672 | IEA | Gene Ontology | protein kinase activity | |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | HDA | Gene Ontology | nucleus | 3 |
| GO:0005886 | IBA | Gene Ontology | plasma membrane | 1 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001611 | Leucine-rich repeat |
| IPR013210 | Leucine-rich repeat-containing N-terminal, plant-type |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR003591 | Leucine-rich repeat, typical subtype |
| IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
| Mapman id | Description |
|---|---|
| 18.4.1.5 | Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-V) |