Gene: AT1G53750

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G53750
  • Transcript Identifier AT1G53750.1
  • Gene Type Coding gene
  • Location Chr1 : 20065921-20068324 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G53750.1
  • symbol RPT1A
  • uniprot Q9SSB5

Descriptions

  • Description regulatory particle triple-A 1A
  • Computational description regulatory particle triple-A 1A (RPT1A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 30646 Blast hits to 28391 proteins in 3108 species: Archae - 1452; Bacteria - 10350; Metazoa - 4866; Fungi - 3564; Plants - 3128; Viruses - 30; Other Eukaryotes - 7256 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030163
IEA
Gene Ontologyprotein catabolic process
GO:0030163
IEA
InterProprotein catabolic process
GO:0045899
IBA
GOA Databasepositive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:1901800
IEA
GOA Databasepositive regulation of proteasomal protein catabolic process
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0006511
TAS
Gene Ontologyubiquitin-dependent protein catabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036402
IBA
IEA
Gene Ontologyproteasome-activating activity1
GO:0036402
IEA
InterProproteasome-activating activity
GO:0016887
IGI
Gene OntologyATP hydrolysis activity3
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0017025
IBA
GOA DatabaseTBP-class protein binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0000502
IDA
Gene Ontologyproteasome complex4
GO:0005829
IDA
GOA Databasecytosol
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
HDA
ISM
TAS
Gene Ontologynucleus5 6
GO:0008540
IDA
IBA
Gene Ontologyproteasome regulatory particle, base subcomplex1 7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003959 ATPase, AAA-type, core
IPR005937 26S proteasome regulatory subunit P45-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
Mapman id Description
19.2.5.2.1.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT1