Gene: AT1G52370

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G52370
  • Transcript Identifier AT1G52370.2
  • Gene Type Coding gene
  • Location Chr1 : 19507052-19508699 : positive

Gene Family Information

  • ID HOM05D003997
  • #Genes/#Species 175/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G52370.2
  • uniprot Q56W16

Descriptions

  • Description Ribosomal protein L22p/L17e family protein
  • Computational description Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1); Has 8369 Blast hits to 8369 proteins in 2950 species: Archae - 0; Bacteria - 5662; Metazoa - 124; Fungi - 79; Plants - 621; Viruses - 0; Other Eukaryotes - 1883 (source: NCBI BLink).
  • Computational description Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0042255
IBA
Gene Ontologyribosome assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0015934
IEA
GOA Databaselarge ribosomal subunit
GO:0015934
IBA
Gene Ontologylarge ribosomal subunit1
GO:0015934
IEA
InterProlarge ribosomal subunit
GO:0005762
IBA
Gene Ontologymitochondrial large ribosomal subunit1
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001063 Ribosomal protein L22/L17
IPR036394 Ribosomal protein L22/L17 superfamily
IPR005727 Ribosomal protein L22, bacterial/chloroplast-type
Mapman id Description
17.7.1.1.21 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL22