Gene: AT1G50510
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G50510
- Transcript Identifier AT1G50510.1
- Gene Type Coding gene
- Location Chr1 : 18716578-18719060 : positive
Gene Family Information
- ID HOM05D005156
- #Genes/#Species 146/98
- Phylogenetic origin
- ID ORTHO05D006710
- #Genes/#Species 139/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G50510.1
- uniprot Q84K35
Descriptions
- Description indigoidine synthase A family protein
- Computational description indigoidine synthase A family protein; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome, plasma membrane; CONTAINS InterPro DOMAIN/s: Indigoidine synthase A like protein (InterPro:IPR007342); Has 1680 Blast hits to 1674 proteins in 598 species: Archae - 0; Bacteria - 980; Metazoa - 68; Fungi - 108; Plants - 51; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | IEA | GOA Database | pseudouridine synthesis | |
| GO:0008152 | IEA | GOA Database | metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004730 | IEA | Gene Ontology | pseudouridylate synthase activity | |
| GO:0004730 | IEA | InterPro | pseudouridylate synthase activity | |
| GO:0030597 | IDA | Gene Ontology | RNA glycosylase activity | 1 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016798 | IEA | InterPro | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005777 | IDA | Gene Ontology | peroxisome | 2 |
| GO:0005886 | IDA | GOA Database | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 6.2.4.7.2 | Nucleotide metabolism.pyrimidines.catabolism.pseudouridine catabolic pathway.pseudouridine monophosphate glycosylase (PUMY) |