Gene: AT1G20090
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G20090
- Transcript Identifier AT1G20090.1
- Gene Type Coding gene
- Location Chr1 : 6967223-6968603 : positive
Gene Family Information
- ID HOM05D000441
- #Genes/#Species 1176/98
- Phylogenetic origin
- ID ORTHO05D000340
- #Genes/#Species 1085/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G20090.1
- symbol ROP2
- Alias ARAC4,Arabidopsis RAC-like 4,ATRAC4,ATROP2
- uniprot Q38919
Descriptions
- Description RHO-related protein from plants 2
- Computational description RHO-related protein from plants 2 (ROP2); CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1); Has 24645 Blast hits to 24619 proteins in 682 species: Archae - 9; Bacteria - 67; Metazoa - 12700; Fungi - 3846; Plants - 2697; Viruses - 20; Other Eukaryotes - 5306 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0007015 | IBA | Gene Ontology | actin filament organization | 1 |
GO:0007163 | IBA | Gene Ontology | establishment or maintenance of cell polarity | 1 |
GO:0030865 | IBA | Gene Ontology | cortical cytoskeleton organization | 1 |
GO:0007264 | IEA | Gene Ontology | small GTPase mediated signal transduction | |
GO:0007264 | IEA | InterPro | small GTPase mediated signal transduction | |
GO:0010119 | IMP | Gene Ontology | regulation of stomatal movement | 2 |
GO:0009860 | IMP | Gene Ontology | pollen tube growth | 3 |
GO:0000226 | IMP | Gene Ontology | microtubule cytoskeleton organization | 4 |
GO:0000902 | IGI | Gene Ontology | cell morphogenesis | 4 |
GO:0009416 | IDA | Gene Ontology | response to light stimulus | 2 |
GO:0048766 | IMP | Gene Ontology | root hair initiation | 5 |
GO:0048767 | IMP | Gene Ontology | root hair elongation | 5 |
GO:0008360 | IBA | Gene Ontology | regulation of cell shape | 1 |
GO:0032956 | IBA | Gene Ontology | regulation of actin cytoskeleton organization | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005525 | IEA | GOA Database | GTP binding | |
GO:0005525 | ISS, IBA | Gene Ontology | GTP binding | 1 6 |
GO:0005525 | IEA | InterPro | GTP binding | |
GO:0003924 | IEA | GOA Database | GTPase activity | |
GO:0003924 | IBA | Gene Ontology | GTPase activity | 1 |
GO:0003924 | IEA | InterPro | GTPase activity | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0005515 | IPI | Gene Ontology | protein binding | 7 |
GO:0019901 | IBA | Gene Ontology | protein kinase binding | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005730 | IDA | GOA Database | nucleolus | |
GO:0005730 | HDA | Gene Ontology | nucleolus | 8 |
GO:0005938 | IBA | Gene Ontology | cell cortex | 1 |
GO:0005886 | IEA | GOA Database | plasma membrane | |
GO:0005886 | IDA IBA | Gene Ontology | plasma membrane | 1 2 |
GO:0042995 | IBA | Gene Ontology | cell projection | 1 |
GO:0005737 | IDA IEA | GOA Database | cytoplasm | |
GO:0005737 | HDA | Gene Ontology | cytoplasm | 8 |
GO:0005634 | IDA | GOA Database | nucleus | |
GO:0005634 | HDA IBA | Gene Ontology | nucleus | 1 8 |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0005856 | IBA | Gene Ontology | cytoskeleton | 1 |
GO:0031410 | IBA | Gene Ontology | cytoplasmic vesicle | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
27.4.1 | Multi-process regulation.Rop-GTPase regulatory system.small GTPase (ROP) |