Gene: AT1G17680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G17680
  • Transcript Identifier AT1G17680.2
  • Gene Type Coding gene
  • Location Chr1 : 6076388-6082160 : positive

Gene Family Information

  • ID HOM05D003469
  • #Genes/#Species 196/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G17680.2
  • uniprot Q8GUP0

Descriptions

  • Description tetratricopeptide repeat (TPR)-containing protein
  • Computational description tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 5585 Blast hits to 3297 proteins in 567 species: Archae - 80; Bacteria - 1266; Metazoa - 1500; Fungi - 759; Plants - 424; Viruses - 52; Other Eukaryotes - 1504 (source: NCBI BLink).
  • Computational description tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 5584 Blast hits to 3296 proteins in 567 species: Archae - 79; Bacteria - 1266; Metazoa - 1500; Fungi - 759; Plants - 424; Viruses - 52; Other Eukaryotes - 1504 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006383
IEA
GOA Databasetranscription by RNA polymerase III
GO:0006383
IBA
Gene Ontologytranscription by RNA polymerase III1
GO:0006383
IEA
InterProtranscription by RNA polymerase III

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0000127
IBA
Gene Ontologytranscription factor TFIIIC complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR039340 Transcription factor Tfc4/TFIIIC-102/Sfc4
IPR019734 Tetratricopeptide repeat
Mapman id Description
15.4.4.4 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC4/Tau131