Gene: AT1G16180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G16180
  • Transcript Identifier AT1G16180.1
  • Gene Type Coding gene
  • Location Chr1 : 5540905-5542670 : positive

Gene Family Information

  • ID HOM05D001040
  • #Genes/#Species 585/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G16180.1
  • uniprot Q9S9L9

Descriptions

  • Description Serinc-domain containing serine and sphingolipid biosynthesis protein
  • Computational description Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G06170.1); Has 780 Blast hits to 770 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 445; Fungi - 127; Plants - 141; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
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Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane1
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005016 Serine incorporator/TMS membrane protein
Mapman id Description
35.1 not assigned.annotated