Gene: AT1G12950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G12950
  • Transcript Identifier AT1G12950.1
  • Gene Type Coding gene
  • Location Chr1 : 4419849-4422462 : positive

Gene Family Information

  • ID HOM05D000048
  • #Genes/#Species 4563/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G12950.1
  • symbol RSH2
  • uniprot Q9LPV4

Descriptions

  • Description root hair specific 2
  • Computational description root hair specific 2 (RSH2); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G26590.1); Has 9730 Blast hits to 9684 proteins in 1960 species: Archae - 180; Bacteria - 6829; Metazoa - 143; Fungi - 326; Plants - 1351; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990961
IEA
Gene Ontologyxenobiotic detoxification by transmembrane export across the plasma membrane
GO:1990961
IEA
InterProxenobiotic detoxification by transmembrane export across the plasma membrane
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0048767
IMP
Gene Ontologyroot hair elongation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042910
IEA
Gene Ontologyxenobiotic transmembrane transporter activity
GO:0042910
IEA
InterProxenobiotic transmembrane transporter activity
GO:0015297
IEA
Gene Ontologyantiporter activity
GO:0015297
IEA
InterProantiporter activity
GO:0022857
IBA
Gene Ontologytransmembrane transporter activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane2
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005774
IBA
Gene Ontologyvacuolar membrane2
GO:0009705
IDA
Gene Ontologyplant-type vacuole membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002528 Multi antimicrobial extrusion protein
IPR045069 Multidrug and toxic compound extrusion family, eukaryotic
Mapman id Description
24.2.4.1.1 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX)