Gene: AT1G12940
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G12940
- Transcript Identifier AT1G12940.1
- Gene Type Coding gene
- Location Chr1 : 4416405-4418337 : positive
Gene Family Information
- ID HOM05D000795
- #Genes/#Species 742/98
- Phylogenetic origin
- ID ORTHO05D000706
- #Genes/#Species 660/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G12940.1
- symbol NRT2.5
- Alias ATNRT2.5,nitrate transporter2.5
- uniprot Q9LPV5
Descriptions
- Description nitrate transporter2.5
- Computational description nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
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Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015707 | ISO | PLAZA Integrative Orthology | nitrite transport | Cre09.g410800 |
| GO:0055085 | IEA | Gene Ontology | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0015706 | IEA | GOA Database | nitrate transport | |
| GO:0015706 | IBA | Gene Ontology | nitrate transport | 1 |
| GO:0042128 | IEA | GOA Database | nitrate assimilation | |
| GO:0071249 | IBA | Gene Ontology | cellular response to nitrate | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os01g0704100 |
| GO:0022857 | IEA | GOA Database | transmembrane transporter activity | |
| GO:0022857 | IEA | InterPro | transmembrane transporter activity | |
| GO:0015112 | IEA | GOA Database | nitrate transmembrane transporter activity | |
| GO:0015112 | ISS, IBA | Gene Ontology | nitrate transmembrane transporter activity | 1 |
| GO:0015112 | IEA | InterPro | nitrate transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:1990351 | ISO | PLAZA Integrative Orthology | transporter complex | Cre09.g410800 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005886 | IDA IEA | GOA Database | plasma membrane | |
| GO:0005886 | IBA | Gene Ontology | plasma membrane | 1 |
| GO:0009705 | IBA | Gene Ontology | plant-type vacuole membrane | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |