Gene: AT1G12870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G12870
  • Transcript Identifier AT1G12870.1
  • Gene Type Coding gene
  • Location Chr1 : 4387129-4389110 : negative

Gene Family Information

  • ID HOM05D001738
  • #Genes/#Species 373/13
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G12870.1
  • uniprot Q9LPW2

Descriptions

  • Description F-box and associated interaction domains-containing protein
  • Computational description F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G12855.1); Has 1934 Blast hits to 1913 proteins in 53 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1930; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IBA
Gene OntologyDNA-binding transcription factor activity1
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0000325
HDA
Gene Ontologyplant-type vacuole2
GO:0005774
IDA
GOA Databasevacuolar membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017451 F-box associated interaction domain
IPR001810 F-box domain
IPR015915 Kelch-type beta propeller
IPR036047 F-box-like domain superfamily
IPR006527 F-box associated domain, type 1
IPR011043 Galactose oxidase/kelch, beta-propeller
Mapman id Description
35.1 not assigned.annotated