Gene: AT1G08350
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G08350
- Transcript Identifier AT1G08350.2
- Gene Type Coding gene
- Location Chr1 : 2632970-2635605 : negative
Gene Family Information
- ID HOM05D000238
- #Genes/#Species 1763/100
- Phylogenetic origin
- ID ORTHO05D001156
- #Genes/#Species 472/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G08350.2
- uniprot F4HW17
Descriptions
- Description Endomembrane protein 70 protein family
- Computational description Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1520 Blast hits to 1507 proteins in 318 species: Archae - 0; Bacteria - 3; Metazoa - 602; Fungi - 224; Plants - 440; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink).
- Computational description Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1602 Blast hits to 1535 proteins in 321 species: Archae - 0; Bacteria - 3; Metazoa - 611; Fungi - 269; Plants - 455; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009624 | IEP | Gene Ontology | response to nematode | 1 |
| GO:0061025 | IMP | Gene Ontology | membrane fusion | 2 |
| GO:0072657 | IBA | Gene Ontology | protein localization to membrane | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005484 | IPI | Gene Ontology | SNAP receptor activity | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0009524 | TAS | Gene Ontology | phragmoplast | 4 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IBA | Gene Ontology | membrane | 3 |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0010008 | IEA | GOA Database | endosome membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004240 | Nonaspanin (TM9SF) |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |