Gene: AT1G06570

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G06570
  • Transcript Identifier AT1G06570.2
  • Gene Type Coding gene
  • Location Chr1 : 2012173-2013543 : negative

Gene Family Information

  • ID HOM05D003673
  • #Genes/#Species 187/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G06570.2
  • symbol PDS1
  • Alias HPD,4-hydroxyphenylpyruvate dioxygenase,HPPD,4-hydroxyphenylpyruvate dioxygenase
  • full_name phytoene desaturation 1
  • uniprot P93836

Descriptions

  • Description 4-hydroxyphenylpyruvate dioxygenase
  • Computational description phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2414 Blast hits to 2412 proteins in 817 species: Archae - 3; Bacteria - 1671; Metazoa - 206; Fungi - 158; Plants - 88; Viruses - 0; Other Eukaryotes - 288 (source: NCBI BLink).
  • Computational description phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016117
IMP
Gene Ontologycarotenoid biosynthetic process1
GO:0009072
IEA
Gene Ontologyaromatic amino acid family metabolic process
GO:0009072
IEA
InterProaromatic amino acid family metabolic process
GO:0006572
IBA
IEA
GOA Databasetyrosine catabolic process
GO:0010236
IMP
Gene Ontologyplastoquinone biosynthetic process1
GO:0010189
IMP
Gene Ontologyvitamin E biosynthetic process1
GO:0006559
IEA
Gene OntologyL-phenylalanine catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016701
IEA
GOA Databaseoxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0016701
IEA
InterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0003868
IBA
GOA Database4-hydroxyphenylpyruvate dioxygenase activity
GO:0003868
IDA
IEA
Gene Ontology4-hydroxyphenylpyruvate dioxygenase activity2
GO:0003868
IEA
InterPro4-hydroxyphenylpyruvate dioxygenase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0042802
IPI
Gene Ontologyidentical protein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009507
ISM
NAS
Gene Ontologychloroplast1
GO:0005576
HDA
Gene Ontologyextracellular region4
GO:0005829
IDA
RCA
Gene Ontologycytosol5 6
GO:0005739
HDA
Gene Ontologymitochondrion7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain
IPR005956 4-hydroxyphenylpyruvate dioxygenase
IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal
IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal
IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Mapman id Description
10.6.2 Redox homeostasis.tocopherol biosynthesis.4-hydroxyphenylpyruvate dioxygenase (HPPD)