Gene: AT1G06580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G06580
  • Transcript Identifier AT1G06580.1
  • Gene Type Coding gene
  • Location Chr1 : 2014440-2015942 : negative

Gene Family Information

  • ID HOM05D000162
  • #Genes/#Species 2282/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G06580.1
  • Alias PPR1,pentatricopeptide repeat 1
  • uniprot Q9SHK2

Descriptions

  • Description Pentatricopeptide repeat (PPR) superfamily protein
  • Computational description Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G64580.1); Has 57463 Blast hits to 14556 proteins in 285 species: Archae - 4; Bacteria - 52; Metazoa - 759; Fungi - 693; Plants - 54152; Viruses - 0; Other Eukaryotes - 1803 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated