Gene: AT1G05630

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G05630
  • Transcript Identifier AT1G05630.1
  • Gene Type Coding gene
  • Location Chr1 : 1682483-1687153 : positive

Gene Family Information

  • ID HOM05D001637
  • #Genes/#Species 394/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G05630.1
  • symbol 5PTASE13
  • Alias AT5PTASE13,Arabidopsis thaliana inositol-polyphosphate 5-phosphatase 13
  • full_name inositol-polyphosphate 5-phosphatase 13
  • uniprot Q9SYK4

Descriptions

  • Description Endonuclease/exonuclease/phosphatase family protein
  • Computational description 5PTASE13; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 2865 Blast hits to 2115 proteins in 235 species: Archae - 0; Bacteria - 18; Metazoa - 1064; Fungi - 695; Plants - 755; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010182
IMP
Gene Ontologysugar mediated signaling pathway1
GO:0048364
IMP
Gene Ontologyroot development1
GO:0009630
IMP
Gene Ontologygravitropism2
GO:0009846
IGI
Gene Ontologypollen germination3
GO:0046855
IDA
IBA
Gene Ontologyinositol phosphate dephosphorylation4 5
GO:0046856
IBA
IEA
Gene Ontologyphosphatidylinositol dephosphorylation5
GO:0046856
IEA
InterProphosphatidylinositol dephosphorylation
GO:0009743
IMP
Gene Ontologyresponse to carbohydrate1
GO:0009737
IMP, IEP
Gene Ontologyresponse to abscisic acid1 4
GO:0007584
IMP
Gene Ontologyresponse to nutrient1
GO:0009637
IMP, IEP
Gene Ontologyresponse to blue light6
GO:0010252
IMP
Gene Ontologyauxin homeostasis7
GO:0010087
IMP
Gene Ontologyphloem or xylem histogenesis7
GO:0009611
IEP
Gene Ontologyresponse to wounding4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004439
IBA
Gene Ontologyphosphatidylinositol-4,5-bisphosphate 5-phosphatase activity5
GO:0052658
IEA
GOA Databaseinositol-1,4,5-trisphosphate 5-phosphatase activity
GO:0052658
IDA
Gene Ontologyinositol-1,4,5-trisphosphate 5-phosphatase activity4
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
IEA
InterProprotein binding
GO:0016791
IEA
Gene Ontologyphosphatase activity
GO:0016791
IEA
InterProphosphatase activity
GO:0004445
IEA
Gene Ontologyinositol-polyphosphate 5-phosphatase activity
GO:0052659
IEA
Gene Ontologyinositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR005135 Endonuclease/exonuclease/phosphatase
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
IPR000300 Inositol polyphosphate-related phosphatase
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
27.5.2.4.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.5-phosphatase activities.type-II inositol-polyphosphate 5-phosphatase