Gene: AT1G04620

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G04620
  • Transcript Identifier AT1G04620.1
  • Gene Type Coding gene
  • Location Chr1 : 1282869-1286492 : negative

Gene Family Information

  • ID HOM05D006620
  • #Genes/#Species 121/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G04620.1
  • symbol HCAR
  • full_name 7-hydroxymethyl chlorophyll a (HMChl) reductase
  • uniprot Q8GS60

Descriptions

  • Description coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
  • Computational description coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family; FUNCTIONS IN: coenzyme F420 hydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal (InterPro:IPR007525), Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal (InterPro:IPR007516); Has 499 Blast hits to 498 proteins in 165 species: Archae - 202; Bacteria - 188; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015994
IDA
Gene Ontologychlorophyll metabolic process1
GO:0033354
IDA
IBA
Gene Ontologychlorophyll cycle1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090415
IDA
IBA
Gene Ontology7-hydroxymethyl chlorophyll a reductase activity1 2
GO:0052592
IBA
Gene Ontologyoxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor2
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM, IBA
Gene Ontologychloroplast1 2
GO:0005576
HDA
Gene Ontologyextracellular region3
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal
IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal
Mapman id Description
7.13.2.3 Coenzyme metabolism.chlorophyll metabolism.chlorophyll catabolism.7-hydroxymethyl chlorophyll(ide) a reductase (HCAR)