Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.4e-270 934.9 463 100.0
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.0e-260 902.9 463 96.3
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 5.6e-259 897.1 459 95.6
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.2e-258 896.0 466 95.1
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 3.1e-257 891.3 464 94.8
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 2.6e-256 888.3 466 94.4
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 5.8e-256 887.1 465 94.6
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.8e-256 887.1 464 94.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.3e-255 885.9 467 94.0
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 9.0e-249 863.2 466 91.6
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.2e-247 858.6 448 93.3
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.1e-243 846.3 463 89.0
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.4e-230 802.7 452 85.2
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 6.7e-228 793.9 468 82.3
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 8.7e-228 793.5 456 83.8
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.5e-227 792.7 457 82.7
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 4.3e-227 791.2 456 83.1
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 9.6e-227 790.0 455 84.2
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 4.8e-226 787.7 462 82.3
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 8.2e-226 786.9 441 83.9
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.1e-225 786.6 450 82.4
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.4e-225 786.2 462 82.9
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 4.1e-225 784.6 454 83.0
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 4.5e-224 781.2 459 81.5
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.8e-224 780.8 433 84.8
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 7.6e-224 780.4 459 81.7
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.0e-223 780.0 443 83.1
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.0e-223 780.0 462 81.6
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.2e-223 778.9 454 82.4
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 2.2e-223 778.9 456 82.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.9e-223 778.5 460 82.4
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 5.0e-223 777.7 463 80.8
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 6.5e-223 777.3 457 81.4
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 8.4e-223 776.9 457 82.1
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.1e-222 776.5 454 82.2
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.4e-222 776.2 450 82.2
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.4e-222 776.2 447 82.6
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.9e-222 775.8 468 81.0
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.9e-222 775.8 451 82.3
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.5e-222 775.4 459 80.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.5e-222 775.4 429 85.5
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 5.5e-222 774.2 456 81.8
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 7.1e-222 773.9 460 82.0
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.2e-221 773.1 444 82.0
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.2e-221 773.1 462 81.2
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.1e-221 772.3 463 81.0
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.7e-221 771.9 449 82.4
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 2.7e-221 771.9 458 81.7
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 2.7e-221 771.9 455 81.1
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 6.1e-221 770.8 457 81.0
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.3e-220 769.6 459 80.2
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.8e-220 769.2 426 85.0
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 3.0e-220 768.5 450 81.1
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 3.9e-220 768.1 462 79.7
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 3.9e-220 768.1 430 84.4
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 6.7e-220 767.3 489 77.5
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 6.7e-220 767.3 451 81.4
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 8.7e-220 766.9 430 84.2
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.5e-219 766.1 442 81.9
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.9e-219 765.8 449 81.7
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 5.7e-219 764.2 458 80.8
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 7.4e-219 763.8 427 84.3
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 9.7e-219 763.5 429 84.4
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.7e-218 761.5 428 84.8
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 4.8e-218 761.1 464 80.0
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 9.0e-217 756.9 464 79.3
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 7.7e-216 753.8 480 77.1
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 6.5e-215 750.7 415 84.6
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.7e-213 745.3 461 77.2
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.0e-212 743.4 421 81.7
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 4.3e-211 738.0 456 77.9
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 5.7e-211 737.6 451 78.3
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.1e-209 733.4 451 78.5
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 4.1e-209 731.5 470 75.5
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 1.2e-208 729.9 446 79.4
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.0e-207 726.9 423 80.4
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.8e-207 724.9 433 79.7
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 6.5e-207 724.2 401 85.0
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.7e-205 718.8 460 75.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 5.1e-204 714.5 401 84.3
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 2.8e-202 708.8 387 89.9
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.8e-202 708.8 418 79.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.8e-201 706.1 425 79.1
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 4.1e-201 704.9 426 77.2
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.5e-200 703.0 478 74.1
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 2.6e-200 702.2 517 69.6
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 5.9e-200 701.0 457 73.3
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 8.0e-197 690.6 428 77.1
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.3e-195 685.3 442 75.3
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 4.1e-193 678.3 396 82.8
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 5.3e-193 677.9 382 84.3
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.6e-192 675.6 492 69.7
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 4.0e-188 661.8 391 80.8
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.1e-185 653.7 462 69.7
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.1e-185 653.7 562 60.7
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 3.7e-178 628.6 421 69.8
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 4.5e-176 621.7 357 82.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.7e-175 619.8 434 70.7
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.8e-165 585.9 426 66.0
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.7e-165 585.1 461 61.4
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.2e-163 580.5 377 76.4
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 6.4e-154 548.1 491 61.1
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 6.4e-138 495.0 272 85.3
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 3.2e-137 492.7 271 86.3
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.1e-136 490.0 374 62.0
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 9.6e-134 481.1 462 56.3
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 1.6e-133 480.3 301 78.1
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.7e-114 417.2 260 79.6
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.5e-65 254.6 147 80.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.7e-61 241.1 190 64.7
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.5e-57 228.0 147 72.1
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.5e-38 164.9 90 81.1
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 3.2e-28 130.6 79 75.9
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 8.1e-24 115.9 84 66.7
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.7e-18 98.2 57 78.9
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.4e-15 88.6 49 85.7
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.4e-12 76.6 49 71.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.4e-12 76.6 42 81.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.6e-11 73.6 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.8e-07 61.6 40 72.5


User provided reference genes

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