Gene: AT1G04230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G04230
  • Transcript Identifier AT1G04230.1
  • Gene Type Coding gene
  • Location Chr1 : 1125576-1127828 : positive

Gene Family Information

  • ID HOM05D004913
  • #Genes/#Species 151/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G04230.1
  • uniprot Q94K10

Descriptions

  • Description rRNA-processing EFG1-like protein (DUF2361)
  • Computational description Protein of unknown function (DUF2361); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2361 (InterPro:IPR019310); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2361) (TAIR:AT5G43720.1); Has 1174 Blast hits to 818 proteins in 194 species: Archae - 0; Bacteria - 26; Metazoa - 566; Fungi - 310; Plants - 87; Viruses - 6; Other Eukaryotes - 179 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
Gene OntologyrRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0000462
IBA
Gene Ontologymaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IBA
Gene Ontologynucleolus1
GO:0030688
IBA
Gene Ontologypreribosome, small subunit precursor1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019310 rRNA-processing protein Efg1
Mapman id Description
35.1 not assigned.annotated