Gene: AT1G01690
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G01690
- Transcript Identifier AT1G01690.2
- Gene Type Coding gene
- Location Chr1 : 249242-252221 : positive
Gene Family Information
- ID HOM05D005648
- #Genes/#Species 137/87
- Phylogenetic origin
- ID ORTHO05D007357
- #Genes/#Species 131/87
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G01690.2
- symbol PRD3
- Alias ATPRD3,ARABIDOPSIS THALIANA PUTATIVE RECOMBINATION INITIATION DEFECTS 3
- uniprot Q0WWX5
Descriptions
- Description putative recombination initiation defects 3
- Computational description putative recombination initiation defects 3 (PRD3); Has 279 Blast hits to 273 proteins in 87 species: Archae - 2; Bacteria - 106; Metazoa - 105; Fungi - 5; Plants - 32; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009554 | ISO | PLAZA Integrative Orthology | megasporogenesis | Os03g0106300 |
| GO:0070192 | IEA | Gene Ontology | chromosome organization involved in meiotic cell cycle | |
| GO:0070192 | IEA | InterPro | chromosome organization involved in meiotic cell cycle | |
| GO:0048236 | IEA | Gene Ontology | plant-type sporogenesis | |
| GO:0048236 | IEA | InterPro | plant-type sporogenesis | |
| GO:0051321 | IEA | GOA Database | meiotic cell cycle | |
| GO:0042138 | IMP IBA | Gene Ontology | meiotic DNA double-strand break formation | 1 2 |
| GO:0009556 | IBA | Gene Ontology | microsporogenesis | 2 |
| GO:0009553 | IMP IBA | Gene Ontology | embryo sac development | 1 2 |
| GO:0051026 | IMP | Gene Ontology | chiasma assembly | 1 |
| GO:0009555 | IMP | Gene Ontology | pollen development | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | GOA Database | protein binding | |
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034546 | Protein PAIR1 |
| Mapman id | Description |
|---|---|
| 13.3.5.2.4 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.accessory protein (PRD3/PAIR1) |