Gene: AT1G01680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G01680
  • Transcript Identifier AT1G01680.1
  • Gene Type Coding gene
  • Location Chr1 : 246411-248329 : negative

Gene Family Information

  • ID HOM05D000163
  • #Genes/#Species 2281/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G01680.1
  • symbol PUB54
  • Alias ATPUB54,PLANT U-BOX 54
  • uniprot Q9LQ92

Descriptions

  • Description plant U-box 54
  • Computational description plant U-box 54 (PUB54); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to stress, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G01660.1); Has 2251 Blast hits to 2122 proteins in 140 species: Archae - 0; Bacteria - 22; Metazoa - 203; Fungi - 25; Plants - 1809; Viruses - 3; Other Eukaryotes - 189 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006468
ISO
PLAZA Homology (enrichment)protein phosphorylation HOM05D000163

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
Gene Ontologyubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000163
GO:0004672
ISO
PLAZA Homology (enrichment)protein kinase activity HOM05D000163

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR003613 U box domain
IPR006016 UspA
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated