Gene: AL3G23340

General Information

Structural Information

Species Arabidopsis lyrata
Gene Identifier AL3G23340
Transcript Identifier AL3G23340.t1
Gene Type Coding gene
Location scaffold_3 : 4719083-4719685 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D008427
#Genes/#Species 55/20
Phylogenetic origin

ID ORTHO05D010551
#Genes/#Species 57/21
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AL3G23340.v2.1
synonym scaffold_301351.1
synonym 928894
pacid 35943835

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006139	IEA	InterPro	nucleobase-containing compound metabolic process
GO:2000630	ISO	PLAZA Integrative Orthology	positive regulation of miRNA metabolic process	AT3G11770

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008408	IEA	InterPro	3'-5' exonuclease activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G11770
GO:0008310	ISO	PLAZA Integrative Orthology	single-stranded DNA 3'-5' exodeoxyribonuclease activity	AT3G11770
GO:0043621	ISO	PLAZA Integrative Orthology	protein self-association	AT3G11770
GO:1905172	ISO	PLAZA Integrative Orthology	RISC complex binding	AT3G11770

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT3G11770
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT3G11770
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT3G11770

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002562	3'-5' exonuclease domain
IPR012337	Ribonuclease H-like superfamily
IPR036397	Ribonuclease H superfamily

Mapman id	Description
35.1	not assigned.annotated