Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G23340 Arabidopsis lyrata HOM05D008427 ORTHO05D010551 2.0e-112 409.1 201 100.0
AT3G11770 Arabidopsis thaliana HOM05D008427 ORTHO05D010551 4.6e-109 397.9 201 97.0
Carub.0003s1111 Capsella rubella HOM05D008427 ORTHO05D010551 8.2e-106 387.1 202 94.6
Sp3g10000 Schrenkiella parvula HOM05D008427 ORTHO05D010551 5.9e-104 380.9 201 91.5
CARHR086320 Cardamine hirsuta HOM05D008427 ORTHO05D010551 1.0e-103 380.2 201 91.0
Thhalv10021553m.g Eutrema salsugineum HOM05D008427 ORTHO05D010551 1.3e-103 379.8 201 91.0
BraA05t22555Z Brassica rapa HOM05D008427 ORTHO05D010551 8.8e-100 367.1 201 87.6
BcaC05g29332 Brassica carinata HOM05D008427 ORTHO05D010551 5.7e-99 364.4 201 87.1
A05p37570 Brassica napus HOM05D008427 ORTHO05D010551 1.7e-98 362.8 201 87.1
C05p56140 Brassica napus HOM05D008427 ORTHO05D010551 2.4e-97 359.0 201 86.1
BolC5t34280H Brassica oleracea HOM05D008427 ORTHO05D010551 2.4e-97 359.0 201 86.1
BcaB06g25585 Brassica carinata HOM05D008427 ORTHO05D010551 1.5e-96 356.3 203 86.7
BcaB04g21117 Brassica carinata HOM05D008427 ORTHO05D010551 8.5e-95 350.5 202 87.6
BcaC09g48194 Brassica carinata HOM05D008427 ORTHO05D010551 2.5e-94 349.0 201 86.6
BolC1t05289H Brassica oleracea HOM05D008427 ORTHO05D010551 9.4e-94 347.1 201 86.1
Aa31LG3G5270 Aethionema arabicum HOM05D008427 ORTHO05D010551 1.0e-92 343.6 202 81.7
BraA01t04160Z Brassica rapa HOM05D008427 ORTHO05D010551 5.1e-92 341.3 201 84.6
Sp6g36410 Schrenkiella parvula HOM05D008427 ORTHO05D010551 1.0e-79 300.4 204 71.6
THA.LOC104826796 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 1.3e-79 300.1 208 66.8
CARHR206740 Cardamine hirsuta HOM05D008427 ORTHO05D010551 2.2e-79 299.3 201 71.6
THA.LOC104816634 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 2.2e-79 299.3 204 70.1
AT5G06450 Arabidopsis thaliana HOM05D008427 ORTHO05D010551 3.6e-77 292.0 203 68.5
Carub.0006s0533 Capsella rubella HOM05D008427 ORTHO05D010551 1.8e-76 289.7 206 68.0
AL6G16540 Arabidopsis lyrata HOM05D008427 ORTHO05D010551 2.3e-76 289.3 205 68.3
A03p02740 Brassica napus HOM05D008427 ORTHO05D010551 5.2e-76 288.1 202 68.3
BraA03t09637Z Brassica rapa HOM05D008427 ORTHO05D010551 5.2e-76 288.1 202 68.3
BolC3t12861H Brassica oleracea HOM05D008427 ORTHO05D010551 6.7e-76 287.7 202 68.8
C03p03160 Brassica napus HOM05D008427 ORTHO05D010551 9.7e-75 283.9 202 68.3
Aa31sc52G280 Aethionema arabicum HOM05D008427 ORTHO05D010551 1.3e-74 283.5 205 68.3
BcaB01g05993 Brassica carinata HOM05D008427 ORTHO05D010551 8.8e-68 260.8 200 64.5
Aa31sc52G270 Aethionema arabicum HOM05D008427 ORTHO05D010551 6.3e-66 254.6 201 62.2
THA.LOC104816632 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 9.8e-59 230.7 203 59.6
THA.LOC104816633 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 5.4e-57 224.9 203 54.7
BcaB07g32741 Brassica carinata HOM05D008427 ORTHO05D010551 2.5e-30 136.3 111 60.4
Thhalv10015043m.g Eutrema salsugineum HOM05D008427 ORTHO05D010551 2.5e-30 136.3 198 40.9
BcaB03g16229 Brassica carinata HOM05D008427 ORTHO05D010551 4.3e-22 109.0 94 60.6
Thecc.05G267200 Theobroma cacao HOM05D008427 ORTHO05D010551 2.2e-18 96.7 197 33.5
Thecc.05G267100 Theobroma cacao HOM05D008427 ORTHO05D010551 4.6e-16 89.0 176 33.0
Atru.chr2.1085 Acer truncatum HOM05D008427 ORTHO05D010551 3.1e-12 76.3 193 29.0
BcaB06g26930 Brassica carinata HOM05D008427 ORTHO05D010551 1.2e-11 74.3 46 78.3
Prupe.4G202600 Prunus persica HOM05D008427 ORTHO05D010551 1.2e-11 74.3 152 32.2
SHI23918 Sapria himalayana HOM05D008427 ORTHO05D000525 1.5e-11 73.9 132 33.3
TPR.G38682 Trifolium pratense HOM05D000886 ORTHO05D000525 7.6e-11 71.6 156 29.5
RcHm_v2.0_Chr5g0037631 Rosa chinensis HOM05D008427 ORTHO05D010551 1.1e-09 67.8 145 27.6
Atru.chr2.1074 Acer truncatum HOM05D008427 ORTHO05D010551 1.4e-09 67.4 124 30.6
Atru.chr2.1095 Acer truncatum HOM05D008427 ORTHO05D010551 1.4e-09 67.4 115 28.7
FvH4_3g21850 Fragaria vesca HOM05D000886 ORTHO05D010551 4.2e-09 65.9 123 28.5
FAN11G0335 Fragaria x ananassa HOM05D000886 ORTHO05D010551 4.2e-09 65.9 123 28.5
Potri.013G049000 Populus trichocarpa HOM05D000886 ORTHO05D010551 1.8e-07 60.5 202 25.7
TPR.G31753 Trifolium pratense HOM05D000886 ORTHO05D000525 1.8e-07 60.5 200 24.5
Atru.chr2.1077 Acer truncatum HOM05D008427 ORTHO05D010551 2.3e-07 60.1 128 34.4
TPR.G40213 Trifolium pratense HOM05D000886 ORTHO05D000525 6.7e-07 58.5 156 29.5
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.1e-06 57.8 185 26.5
Sabra13G0045300 Salix brachista HOM05D000886 ORTHO05D000525 1.1e-06 57.8 93 36.6
Ca_10270_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.9e-06 57.0 169 27.2
Nitab4.5_0000699g0130 Nicotiana tabacum HOM05D000886 ORTHO05D000525 4.3e-06 55.8 179 25.1


User provided reference genes

Program Settings