Gene: AL2G39280

General Information

Structural Information

Species Arabidopsis lyrata
Gene Identifier AL2G39280
Transcript Identifier AL2G39280.t1
Gene Type Coding gene
Location scaffold_2 : 18377334-18379232 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000050
#Genes/#Species 4474/100
Phylogenetic origin

ID ORTHO05D002706
#Genes/#Species 268/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AL2G39280.v2.1
synonym scaffold_202860.1
synonym 927299
pacid 35946599

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010053	ISO	PLAZA Integrative Orthology	root epidermal cell differentiation	AT1G78870
GO:0010039	ISO	PLAZA Integrative Orthology	response to iron ion	AT1G78870
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT1G78870
GO:0006301	ISO	PLAZA Integrative Orthology	postreplication repair	AT1G78870
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT1G78870

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT1G78870
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G78870

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031372	ISO	PLAZA Integrative Orthology	UBC13-MMS2 complex	AT1G78870

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme E2

Mapman id	Description
19.2.2.1.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)