Gene: AL2G38220

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL2G38220
  • Transcript Identifier AL2G38220.t1
  • Gene Type Coding gene
  • Location scaffold_2 : 17888348-17891333 : positive

Gene Family Information

  • ID HOM05D004532
  • #Genes/#Species 159/69
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL2G38220.v2.1
  • synonym 476959
  • synonym fgenesh2_kg.2__2089__AT1G77950.1
  • pacid 35946371

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010152
ISO
PLAZA Tree-based Orthologypollen maturation AT1G22130
GO:0009555
ISO
PLAZA Tree-based Orthologypollen development AT1G22130
GO:0006355
ISO
PLAZA Tree-based Orthologyregulation of transcription, DNA-templated AT1G77980
GO:0045944
ISO
PLAZA Homology (enrichment)positive regulation of transcription by RNA polymerase II HOM05D004532
GO:0080092
ISO
PLAZA Tree-based Orthologyregulation of pollen tube growth AT1G22130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G77950
GO:0000977
ISO
PLAZA Homology (enrichment)RNA polymerase II transcription regulatory region sequence-specific DNA binding HOM05D004532

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G77950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)