Gene: AL1G62620
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL1G62620
- Transcript Identifier AL1G62620.t1
- Gene Type Coding gene
- Location scaffold_1 : 28877906-28879220 : positive
Gene Family Information
- ID HOM05D000245
- #Genes/#Species 1725/99
- Phylogenetic origin
- ID ORTHO05D000020
- #Genes/#Species 4054/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id AL1G62620.v2.1
- synonym 923954
- synonym scaffold_105235.1
- pacid 35933458
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009873 | IEA | InterPro | ethylene-activated signaling pathway | |
| GO:2000280 | ISO | PLAZA Integrative Orthology | regulation of root development | AT1G53910 |
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT1G53910 |
| GO:0070483 | ISO | PLAZA Integrative Orthology | detection of hypoxia | AT1G53910 |
| GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | Solyc06g063070.3 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc06g063070.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G53910 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G53910 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G53910 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G53910 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.1 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF) |