Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
arahy.Tifrunner.gnm1.ann1.AT7H7M K03093 - RNA polymerase sigma factor (SIGMA70) arahy.Tifrunner.gnm1.Arahy.08 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia34200 Lachesis_group3 + View
Avicennia marina MSTRG.60 ScioBoG_102831_HRSCAF_103044 - View
Amaranthus hybridus Ah.13g069910 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial (Sigma factor E) (Sigma-E) (RNA polymerase sigma factor sig5) (Atsig5) (Sigma factor 5) AmaHy_arrow1_Scaffold_13 + View
Beta vulgaris EL10Ac3g05344 K03093 - RNA polymerase sigma factor (SIGMA70) Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0033126 hypothetical protein PRUPE_ppa004259mg [Prunus persica] Chr1 + View
Camellia sinensis var. sinensis CSS0047578 hypothetical protein PRUPE_ppa004259mg [Prunus persica] Contig86 - View
Capsicum annuum CAN.G108.31 PGAv.1.6.scaffold108 + View
Cannabis sativa CANSAT21G1247 NC_044374.1 - View
Cicer arietinum L. Ca_16675_v3 Ca_LG5_v3 + View
Coffea canephora Cc02_g01850 sigma factor E chr2 - View
Citrus clementina Ciclev10004760m.g scaffold_9 + View
Ceratophyllum demersum CDE08G1386 6 + View
Carpinus fangiana Cfa016364 Cfa06 + View
Carya illinoinensis CiPaw.06G007800 PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Chr06 + View
Citrullus lanatus ClCG05G008730 RNA polymerase sigma factor rpoD, putative CG_Chr05 + View
Corchorus olitorius COL.COLO4_35652 RNA polymerase sigma-70 AWUE01022760.1 - View
Carica papaya Cpa.g.sc3.54 supercontig_3 + View
Chenopodium quinoa AUR62006149 SIGE: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial C_Quinoa_Scaffold_1001 - View
Chenopodium quinoa AUR62019340 SIGE: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial C_Quinoa_Scaffold_3107 + View
Cucumis sativus L. CsaV3_3G021990 RNA polymerase sigma factor chr3 + View
Davidia involucrata Dinv28334 GWHABJS00000004 - View
Davidia involucrata Dinv35309 GWHABJS00000009 - View
Durio zibethinus Duzib205G0306 NW_019168381.1 + View
Eucalyptus grandis Eucgr.A02665 Chr01 - View
Erythranthe guttata Migut.F00241 scaffold_6 - View
Erythranthe guttata Migut.F01049 scaffold_6 - View
Fragaria x ananassa FAN01G1592 K03093 - RNA polymerase sigma factor (SIGMA70) Fvb7-4 - View
Fragaria x ananassa FAN10G0156 K03093 - RNA polymerase sigma factor (SIGMA70) Fvb7-1 + View
Fragaria x ananassa FAN06G2664 K03093 - RNA polymerase sigma factor (SIGMA70) Fvb7-2 + View
Fragaria x ananassa FAN03G2915 K03093 - RNA polymerase sigma factor (SIGMA70) Fvb7-3 - View
Fragaria x ananassa FAN10G3897 K03093 - RNA polymerase sigma factor (SIGMA70) Fvb7-1 + View
Fragaria x ananassa FAN06G3876 K03093 - RNA polymerase sigma factor (SIGMA70) Fvb7-2 + View
Fragaria vesca FvH4_7g31060 PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Fvb7 + View
Gossypium hirsutum Gohir.A12G251600 PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL A12 - View
Gossypium hirsutum Gohir.D12G252400 PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL D12 - View
Glycine max Glyma.14G160600 K03093 - RNA polymerase sigma factor (SIGMA70) Gm14 - View
Glycine max Glyma.13G041200 K03093 - RNA polymerase sigma factor (SIGMA70) Gm13 + View
Glycine max Glyma.06G125700 K03093 - RNA polymerase sigma factor (SIGMA70) Gm06 + View
Glycine max Glyma.04G238200 K03093 - RNA polymerase sigma factor (SIGMA70) Gm04 - View
Gossypium raimondii Gorai.008G270500 Chr08 - View
Helianthus annuus HanXRQChr14g0462871 Putative RNA polymerase sigma-70 like domain HanXRQChr14 + View
Lupinus albus Lalb_Chr11g0066581 PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Lalb_Chr11 + View
Lotus japonicus Lj1g0020917 K03093 - RNA polymerase sigma factor (SIGMA70) chr1 - View
Lonicera japonica Lj3A910T45 GWHAAZE00000003 - View
Malus domestica MD01G1215400 sigma factor E Chr01 + View
Malus domestica MD07G1285600 sigma factor E Chr07 + View
Manihot esculenta Manes.14G018500 Chromosome14 - View
Manihot esculenta Manes.06G157400 Chromosome06 + View
Medicago truncatula Medtr3g090900 RNA polymerase sigma factor chr3 + View
Nelumbo nucifera Nn3g19059 chr3 - View
Olea europaea Oeu041347.1 chr1 - View
Olea europaea Oeu049102.1 chr12 - View
Petunia axillaris Peaxi162Scf00904g00132 RNA polymerase sigma factor RpoD Peaxi162Scf00904 - View
Punica granatum PGR042G2574 NC_045130.1 - View
Prunus persica Prupe.2G307500 PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Pp02 + View
Pisum sativum Psat5g079640 Sigma-70 region 2 chr5LG3 - View
Papaver somniferum PSO384G3210 NC_039368.1 - View
Papaver somniferum PSO135G0769 NW_020631041.1 + View
Populus trichocarpa Potri.015G022100 PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Chr15 - View
Phaseolus vulgaris Phvul.009G137600 K03093 - RNA polymerase sigma factor (SIGMA70) Chr09 + View
Quercus lobata QL09p010880 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0380131 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0198900 chr03 + View
Striga asiatica SGA_v2.0_scaffold192G40574 scaffold192 - View
Salvia bowleyana SalBow2G2003 GWHASIU00000007 - View
Salix brachista Sabra15G0016500 GWHAAZH00000015 - View
Simmondsia chinensis Sc19g0001140 GWHAASQ00000019 + View
Sechium edule Sed0009531 LG07 + View
Solanum lycopersicum Solyc03g007370.3 Sigma factor (AHRD V3.3 *** A0A0G2STU5_9ROSI) SL4.0ch03 - View
Solanum pennellii Sopen03g003330 Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes. | sigma factor E (SIGE) | CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 , Winged helix-turn-helix transcription repressor DNA-binding , RNA polymerase sigma-70 region 3 , RNA polymerase sigma-70 , RNA polymerase sigma factor, region 3/4 , RNA polymerase sigma-70 region 2 , RNA polymerase sigma-70 region 4 , RNA polymerase sigma-70 factor | BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400009072 RNA polymerase sigma factor rpoD ST4.03ch03 + View
Trochodendron aralioides TAR374G1373 group12 + View
Trochodendron aralioides TAR375G1058 group15 + View
Theobroma cacao Thecc.03G193300 Sigma factor E Chromosome_3 + View
Trifolium pratense TPR.G17303 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI14G0873 NC_052249.1 + View
Tripterygium wilfordii TWI23G1148 NC_052239.1 - View
Tripterygium wilfordii TWI39G0830 NC_052250.1 + View
Vaccinium macrocarpon vmacro06574 Similar to SIGE: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1129 CM024072.1 + View
Vitis vinifera GSVIVG01028717001 chr16 + View