Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G13450 LG-5 - View
Arabidopsis lyrata AL6G27810 scaffold_6 - View
Arabidopsis lyrata AL3G12410 scaffold_3 - View
Arabidopsis thaliana AT5G16790 Tho complex subunit 7/Mft1p Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860)%2C THO2 (At1g24706)%2C THO3 or TEX1 (At5g56130)%2C THO5 (At5g42920%2C At1g45233)%2C THO6 (At2g19430)%2C and THO7 (At5g16790%2C At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1%2C THO1%2C THO6 accumulate reduced amount of small interfering (si)RNA%2C suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. THO7%3B CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 (InterPro:IPR018018)%2C Tho complex subunit 7/Mft1p (InterPro:IPR008501)%3B BEST Arabidopsis thaliana protein match is: Tho complex subunit 7/Mft1p (TAIR:AT3G02950.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G02950 Tho complex subunit 7/Mft1p Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860)%2C THO2 (At1g24706)%2C THO3 or TEX1 (At5g56130)%2C THO5 (At5g42920%2C At1g45233)%2C THO6 (At2g19430)%2C and THO7 (At5g16790%2C At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1%2C THO1%2C THO6 accumulate reduced amount of small interfering (si)RNA%2C suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. THO7%3B CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 (InterPro:IPR018018)%2C Tho complex subunit 7/Mft1p (InterPro:IPR008501)%3B BEST Arabidopsis thaliana protein match is: Tho complex subunit 7/Mft1p (TAIR:AT5G16790.1)%3B Has 2509 Blast hits to 2230 proteins in 391 species: Archae - 54%3B Bacteria - 255%3B Metazoa - 1226%3B Fungi - 237%3B Plants - 121%3B Viruses - 25%3B Other Eukaryotes - 591 (source: NCBI BLink). Chr3 - View
Brassica napus A05p44170 A05 + View
Brassica napus C05p63850 C05 + View
Brassica oleracea BolC5t35050H C5 + View
Brassica rapa BraSC90t46693Z Brapa_scaffold_90 - View
Corylus avellana Haze_00396 Similar to THO7B: THO complex subunit 7B (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10021949m.g scaffold_3 - View
Carpinus fangiana Cfa016051 Cfa06 + View
Cardamine hirsuta CARHR076980 THO complex subunit-like protein Chr3 - View
Cardamine hirsuta CARHR196370 THO complex subunit-like protein Chr6 + View
Carya illinoinensis CiPaw.06G034400 K13176 - THO complex subunit 7 (THOC7) Chr06 + View
Capsella rubella Carub.0006s1501 K13176 - THO complex subunit 7 (THOC7) scaffold_6 - View
Capsella rubella Carub.0003s0208 K13176 - THO complex subunit 7 (THOC7) scaffold_3 - View
Durio zibethinus Duzib177G0947 NW_019168004.1 + View
Durio zibethinus Duzib106G0272 NW_019168492.1 - View
Eutrema salsugineum Thhalv10021437m.g K13176 - THO complex subunit 7 (THOC7) scaffold_13 + View
Gossypium hirsutum Gohir.D03G052000 K13176 - THO complex subunit 7 (THOC7) D03 + View
Gossypium raimondii Gorai.003G054000 Chr03 + View
Populus trichocarpa Potri.013G080200 K13176 - THO complex subunit 7 (THOC7) Chr13 + View
Quercus lobata QL09p023193 9 - View
Salix brachista Sabra13G0072900 GWHAAZH00000013 - View
Sechium edule Sed0003176 LG01 - View
Trochodendron aralioides TAR374G0042 group12 - View
Theobroma cacao Thecc.05G216000 Tho complex subunit 7/Mft1p Chromosome_5 + View
Tarenaya hassleriana THA.LOC104820896 THO complex subunit 7A NW_010966372.1 + View