Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen01g053210 Translocon-associated protein (TRAP), alpha subunit | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system, endoplasmic reticulum | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit | BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit Spenn-ch01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.3228 chr5 + View
Actinidia chinensis Actinidia20486 Lachesis_group25 - View
Actinidia chinensis Actinidia23680 Lachesis_group23 + View
Actinidia chinensis Actinidia27836 Lachesis_group16 + View
Actinidia chinensis Actinidia00596 Lachesis_group12 - View
Arabidopsis lyrata AL4G10250 scaffold_4 + View
Arabidopsis lyrata AL3G49200 scaffold_3 + View
Avicennia marina MSTRG.20035 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.5427 ScioBoG_102838_HRSCAF_103081 - View
Amaranthus hybridus Ah.01g022590 AmaHy_arrow1_Scaffold_1 + View
Amaranthus hybridus Ah.01g009150 Translocon-associated protein subunit alpha (TRAP-alpha) (Signal sequence receptor subunit alpha) (SSR-alpha) AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TX33M9 K13249 - translocon-associated protein subunit alpha (SSR1) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8AQG7F K13249 - translocon-associated protein subunit alpha (SSR1) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT2G21160 Translocon-associated protein (TRAP), alpha subunit Translocon-associated protein (TRAP)%2C alpha subunit%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid membrane%2C endoplasmic reticulum%2C plasma membrane%2C vacuole%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP)%2C alpha subunit (InterPro:IPR005595)%3B BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP)%2C alpha subunit (TAIR:AT2G16595.1)%3B Has 246 Blast hits to 246 proteins in 95 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 141%3B Fungi - 24%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 21 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT2G16595 Translocon-associated protein (TRAP), alpha subunit Translocon-associated protein (TRAP)%2C alpha subunit%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%2C endoplasmic reticulum%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP)%2C alpha subunit (InterPro:IPR005595)%3B BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP)%2C alpha subunit (TAIR:AT2G21160.1)%3B Has 245 Blast hits to 245 proteins in 98 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 135%3B Fungi - 29%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 21 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB03g16378 ChrB03 + View
Brassica carinata BcaB08g34966 ChrB08 + View
Brassica napus A09p58490 A09 - View
Brassica napus C04p50390 C04 + View
Brassica napus C08p41790 C08 - View
Brassica oleracea BolC8t51742H C8 - View
Brassica rapa BraA09t41236Z A09 - View
Beta vulgaris EL10Ac9g21437 K13249 - translocon-associated protein subunit alpha (SSR1) Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0011216 hypothetical protein PRUPE_ppa010234mg [Prunus persica] Chr3 - View
Camellia sinensis var. sinensis CSS0026989 PREDICTED: translocon-associated protein subunit alpha [Vitis vinifera] Chr6 + View
Capsicum annuum CAN.G588.27 PGAv.1.6.scaffold588 + View
Cannabis sativa CANSAT25G2163 NC_044370.1 + View
Cicer arietinum L. Ca_15315_v3 Ca_LG5_v3 - View
Cicer arietinum L. Ca_19001_v3 Ca_LG6_v3 + View
Corylus avellana Haze_02196 Similar to At2g21160: Translocon-associated protein subunit alpha (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g16510 Translocon-associated protein subunit alpha chr2 - View
Citrus clementina Ciclev10028497m.g scaffold_8 + View
Ceratophyllum demersum CDE05G1728 3 + View
Ceratophyllum demersum CDE05G0805 3 - View
Carpinus fangiana Cfa005185 Cfa02 + View
Cardamine hirsuta CARHR106800 Translocon-associated protein, alpha subunit, putative Chr3 + View
Cardamine hirsuta CARHR112010 Translocon-associated protein subunit alpha Chr4 + View
Carya illinoinensis CiPaw.05G077400 K13249 - translocon-associated protein subunit alpha (SSR1) Chr05 + View
Carya illinoinensis CiPaw.06G125200 K13249 - translocon-associated protein subunit alpha (SSR1) Chr06 - View
Citrullus lanatus ClCG02G011370 Translocon-associated protein, alpha subunit, putative CG_Chr02 - View
Cucumis melo MELO3C020784.2 translocon-associated protein subunit alpha chr11 - View
Cucumis melo MELO3C013377.2 translocon-associated protein subunit alpha-like chr01 - View
Carica papaya Cpa.g.sc37.190 supercontig_37 - View
Chenopodium quinoa AUR62013088 At2g21160: Translocon-associated protein subunit alpha C_Quinoa_Scaffold_1040 - View
Chenopodium quinoa AUR62010092 At2g21160: Translocon-associated protein subunit alpha C_Quinoa_Scaffold_1257 - View
Capsella rubella Carub.0003s3036 K13249 - translocon-associated protein subunit alpha (SSR1) scaffold_3 + View
Capsella rubella Carub.0004s0018 K13249 - translocon-associated protein subunit alpha (SSR1) scaffold_4 + View
Cucumis sativus L. CsaV3_2G015720 translocon-associated protein subunit alpha chr2 + View
Cucumis sativus L. CsaV3_7G000800 translocon-associated protein subunit alpha-like chr7 + View
Daucus carota DCAR_022954 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_003700 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv41974 GWHABJS00000002 + View
Davidia involucrata Dinv04968 GWHABJS00000005 - View
Durio zibethinus Duzib052G0135 NW_019167849.1 + View
Durio zibethinus Duzib132G0578 NW_019167915.1 - View
Durio zibethinus Duzib248G0234 NW_019168048.1 + View
Eucalyptus grandis Eucgr.I01376 Chr09 + View
Erythranthe guttata Migut.B00168 scaffold_2 + View
Erythranthe guttata Migut.N01281 scaffold_14 - View
Eutrema salsugineum Thhalv10000294m.g K13249 - translocon-associated protein subunit alpha (SSR1) scaffold_15 + View
Eutrema salsugineum Thhalv10022826m.g K13249 - translocon-associated protein subunit alpha (SSR1) scaffold_11 - View
Fragaria x ananassa FAN27G2842 K13249 - translocon-associated protein subunit alpha (SSR1) Fvb2-1 - View
Fragaria x ananassa FAN24G1635 K13249 - translocon-associated protein subunit alpha (SSR1) Fvb2-2 + View
Fragaria x ananassa FAN20G2314 K13249 - translocon-associated protein subunit alpha (SSR1) Fvb2-3 + View
Fragaria x ananassa FAN15G2172 K13249 - translocon-associated protein subunit alpha (SSR1) Fvb2-4 - View
Fragaria vesca FvH4_2g01990 K13249 - translocon-associated protein subunit alpha (SSR1) Fvb2 - View
Gossypium hirsutum Gohir.D01G155966 PTHR12924:SF0 - LD26546P D01 + View
Gossypium hirsutum Gohir.A01G164000 K13249 - translocon-associated protein subunit alpha (SSR1) A01 + View
Gossypium hirsutum Gohir.A03G203300 K13249 - translocon-associated protein subunit alpha (SSR1) A03 + View
Gossypium hirsutum Gohir.D02G224600 K13249 - translocon-associated protein subunit alpha (SSR1) D02 + View
Gossypium hirsutum Gohir.A12G039300 PTHR12924:SF0 - LD26546P A12 - View
Gossypium hirsutum Gohir.D04G165000 K13249 - translocon-associated protein subunit alpha (SSR1) D04 - View
Gossypium hirsutum Gohir.A04G123000 K13249 - translocon-associated protein subunit alpha (SSR1) A04 - View
Gossypium hirsutum Gohir.D12G033100 K13249 - translocon-associated protein subunit alpha (SSR1) D12 + View
Gossypium raimondii Gorai.002G193400 Chr02 + View
Gossypium raimondii Gorai.005G252400 Chr05 + View
Gossypium raimondii Gorai.012G153400 Chr12 - View
Gossypium raimondii Gorai.008G033900 Chr08 + View
Helianthus annuus HanXRQChr17g0553711 Probable translocon-associated protein (TRAP), alpha subunit HanXRQChr17 + View
Lupinus albus Lalb_Chr01g0001321 K13249 - translocon-associated protein subunit alpha (SSR1) Lalb_Chr01 + View
Lotus japonicus Lj3g0013984 K13249 - translocon-associated protein subunit alpha (SSR1) chr3 + View
Lactuca sativa Lsat_1_v5_gn_4_74620 K13249 - translocon-associated protein subunit alpha (SSR1) Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_8_125920 K13249 - translocon-associated protein subunit alpha (SSR1) Lsat_1_v8_lg_8 + View
Malus domestica MD10G1118300 Translocon-associated protein (TRAP) Chr10 + View
Manihot esculenta Manes.04G078100 Chromosome04 - View
Manihot esculenta Manes.11G090100 Chromosome11 + View
Medicago truncatula Medtr4g075340 translocon-associated protein alpha subunit chr4 - View
Medicago truncatula Medtr3g117740 translocon-associated protein alpha subunit chr3 + View
Nelumbo nucifera Nn1g05900 chr1 + View
Nicotiana tabacum Nitab4.5_0000956g0220 Translocon-associated protein (TRAP), alpha subunit Nitab4.5_0000956 - View
Nicotiana tabacum Nitab4.5_0000283g0130 Translocon-associated protein (TRAP), alpha subunit Nitab4.5_0000283 - View
Nicotiana tabacum Nitab4.5_0000980g0230 Translocon-associated protein (TRAP), alpha subunit Nitab4.5_0000980 - View
Olea europaea Oeu008609.2 scaffold1314 - View
Petunia axillaris Peaxi162Scf00538g00519 Translocon-associated protein subunit alpha Peaxi162Scf00538 + View
Petunia axillaris Peaxi162Scf00684g00024 Translocon-associated protein subunit alpha Peaxi162Scf00684 - View
Petunia axillaris Peaxi162Scf00362g01035 Translocon-associated protein subunit alpha Peaxi162Scf00362 - View
Punica granatum PGR142G3290 NC_045128.1 - View
Prunus persica Prupe.8G160800 K13249 - translocon-associated protein subunit alpha (SSR1) Pp08 + View
Papaver somniferum PSO541G5481 NC_039363.1 + View
Populus trichocarpa Potri.009G129800 K13249 - translocon-associated protein subunit alpha (SSR1) Chr09 + View
Populus trichocarpa Potri.004G168500 K13249 - translocon-associated protein subunit alpha (SSR1) Chr04 + View
Quercus lobata QL11p047618 11 + View
Rhododendron simsii Rhsim05G0063100 chr05 - View
Salvia bowleyana SalBow3G3144 GWHASIU00000006 + View
Salix brachista Sabra04G0112900 GWHAAZH00000004 + View
Sechium edule Sed0009057 LG01 - View
Sechium edule Sed0028085 LG05 - View
Sechium edule Sed0022407 LG05 + View
Sechium edule Sed0027417 LG04 - View
Solanum lycopersicum Solyc10g054880.3 Translocon-associated protein subunit alpha (AHRD V3.3 *** A0A2G2YK39_CAPAN) SL4.0ch10 + View
Solanum lycopersicum Solyc01g111150.2 Translocon-associated protein subunit alpha (AHRD V3.3 *** A0A1U8F1N5_CAPAN) SL4.0ch01 + View
Schrenkiella parvula Sp4g00310 K13249 - translocon-associated protein subunit alpha (SSR1) ch4-1 + View
Solanum tuberosum PGSC0003DMG400004442 Translocon-associated protein, alpha subunit ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400001632 Translocon-associated protein, alpha subunit ST4.03ch01 + View
Selenicereus undatus Hund06406 Scaffold_33676 + View
Selenicereus undatus Hund00044 Scaffold_33678 - View
Trochodendron aralioides TAR628G1633 group5 + View
Theobroma cacao Thecc.02G066800 Translocon-associated protein subunit alpha Chromosome_2 - View
Tarenaya hassleriana THA.LOC104824775 translocon-associated protein subunit alpha-like NW_010966933.1 - View
Tarenaya hassleriana THA.LOC104807786 translocon-associated protein subunit alpha NW_010963495.1 + View
Tarenaya hassleriana THA.LOC104807276 translocon-associated protein subunit alpha-like isoform X1 NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104804099 translocon-associated protein subunit alpha-like NW_010971389.1 - View
Trifolium pratense TPR.G38496 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI79G0488 NC_052238.1 - View
Tripterygium wilfordii TWI31G1043 NC_052233.1 - View
Vaccinium macrocarpon vmacro02250 Similar to At2g21160: Translocon-associated protein subunit alpha (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro17381 Similar to At2g21160: Translocon-associated protein subunit alpha (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01024082001 chr3 + View