Gene: Solyc10g054880.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g054880.3
- Transcript Identifier Solyc10g054880.3.1
- Gene Type Coding gene
- Location SL4.0ch10 : 55095924-55100110 : positive
Gene Family Information
- ID HOM05D003396
- #Genes/#Species 201/93
- Phylogenetic origin
- ID ORTHO05D003646
- #Genes/#Species 211/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc10g054880.3.1
- uniprot A0A3Q7IHA1
- gene_id Solyc10g054880
Descriptions
- Description Translocon-associated protein subunit alpha (AHRD V3.3 *** A0A2G2YK39_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0005789 | IEA | InterPro | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005783 | IBA IEA | GOA Database | endoplasmic reticulum | |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT2G21160 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G21160 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G21160 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G21160 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT2G21160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005595 | Translocon-associated protein (TRAP), alpha subunit |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |