Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen06g026310 Translation elongation factor EF1A/initiation factor IF2gamma family protein | FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal , Translation elongation factor EFTu/EF1A, domain 2 , Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal , Protein synthesis factor, GTP-binding , Translation elongation/initiation factor/Ribosomal, beta-barrel | BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein ., Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot), Elongation factor, GTP-binding domain Spenn-ch06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G4010 LG-4 + View
Acer truncatum Atru.chr9.943 chr9 - View
Actinidia chinensis Actinidia35108 Lachesis_group2 - View
Actinidia chinensis Actinidia18915 Lachesis_group9 - View
Arabidopsis lyrata AL1G30430 scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WFT48X K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z4P8EM PTHR23115//PTHR23115:SF133 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EBY6Y5 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K2X0H0 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT1G18070 Translation elongation factor EF1A/initiation factor IF2gamma family protein Translation elongation factor EF1A/initiation factor IF2gamma family protein%3B FUNCTIONS IN: translation factor activity%2C nucleic acid binding%2C GTP binding%2C translation release factor activity%2C GTPase activity%3B INVOLVED IN: translational termination%3B LOCATED IN: vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A%2C C-terminal (InterPro:IPR004160)%2C Translation elongation factor EFTu/EF1A%2C domain 2 (InterPro:IPR004161)%2C Translation elongation factor EF1A/initiation factor IF2gamma%2C C-terminal (InterPro:IPR009001)%2C Protein synthesis factor%2C GTP-binding (InterPro:IPR000795)%2C Translation elongation/initiation factor/Ribosomal%2C beta-barrel (InterPro:IPR009000)%2C Yeast eukaryotic release factor (InterPro:IPR003285)%3B BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3)%3B Has 80701 Blast hits to 80623 proteins in 18440 species: Archae - 844%3B Bacteria - 33853%3B Metazoa - 20485%3B Fungi - 12327%3B Plants - 1789%3B Viruses - 3%3B Other Eukaryotes - 11400 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC06g34535 ChrC06 + View
Brassica carinata BcaC05g25700 ChrC05 - View
Brassica napus C07p27470 C07 - View
Brassica napus C05p16390 C05 - View
Brassica oleracea BolC5t30336H C5 - View
Capsicum annuum CAN.G423.19 PGAv.1.6.scaffold423 - View
Capsicum annuum CAN.G1129.34 PGAv.1.6.scaffold1129 + View
Cannabis sativa CANSAT80G0534 NC_044372.1 - View
Cicer arietinum L. Ca_25307_v3 Ca_LG8_v3 + View
Cicer arietinum L. Ca_17221_v3 Ca_LG6_v3 + View
Corylus avellana Haze_18789 Similar to EF1A: Elongation factor 1-alpha (Zea mays OX%3D4577) 7 + View
Coffea canephora Cc04_g06660 Translation elongation factor EF1A/initiation factor IF2gamma family protein chr4 + View
Citrus clementina Ciclev10008034m.g scaffold_1 + View
Cardamine hirsuta CARHR018650 Elongation factor 1 alpha Chr1 - View
Carya illinoinensis CiPaw.16G090500 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Chr16 - View
Citrullus lanatus ClCG04G010790 Elongation factor 1 alpha CG_Chr04 + View
Cucumis melo MELO3C002118.2 Elongation factor 1 alpha chr12 + View
Carica papaya Cpa.g.sc3.423 supercontig_3 - View
Capsella rubella Carub.0001s1774 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) scaffold_1 - View
Capsella rubella Carub.0008s0375 PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED scaffold_8 + View
Cucumis sativus L. CsaV3_1G007000 Elongation factor chr1 - View
Daucus carota DCAR_011380 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv19662 GWHABJS00000019 + View
Durio zibethinus Duzib084G0982 NW_019167827.1 - View
Erigeron canadensis ECA233G2375 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.B00852 Chr02 - View
Eucalyptus grandis Eucgr.K02259 Chr11 - View
Eutrema salsugineum Thhalv10007335m.g PTHR23115//PTHR23115:SF133 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED scaffold_5 + View
Fragaria x ananassa FAN18G4332 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Fvb5-1 - View
Fragaria x ananassa FAN04G2055 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Fvb5-4 - View
Fragaria x ananassa FAN08G0202 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Fvb5-3 + View
Fragaria vesca FvH4_5g17000 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Fvb5 - View
Gossypium hirsutum Gohir.A11G004200 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) A11 + View
Gossypium hirsutum Gohir.D09G171300 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) D09 + View
Gossypium hirsutum Gohir.A09G174400 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) A09 + View
Gossypium hirsutum Gohir.D11G003700 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) D11 + View
Glycine max Glyma.05G243400 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Gm05 - View
Glycine max Glyma.08G051200 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Gm08 - View
Gossypium raimondii Gorai.007G004700 Chr07 + View
Gossypium raimondii Gorai.006G193100 Chr06 + View
Lupinus albus Lalb_Chr05g0221891 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0387211 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Lalb_Chr16 + View
Lupinus albus Lalb_Chr09g0330591 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Lalb_Chr09 + View
Lotus japonicus Lj4g0000794 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) chr4 + View
Malus domestica MD06G1224200 Translation elongation factor EF1A/initiation factor IF2gamma family protein Chr06 - View
Malus domestica MD14G1233200 Translation elongation factor EF1A/initiation factor IF2gamma family protein Chr14 - View
Manihot esculenta Manes.06G008800 Chromosome06 + View
Medicago truncatula Medtr8g106700 GTP-binding elongation factor Tu family protein chr8 - View
Medicago truncatula Medtr6g080420 elongation factor Tu (EF-Tu) GTP-binding family protein chr6 + View
Punica granatum PGR083G2432 NC_045133.1 + View
Punica granatum PGR044G1629 NC_045134.1 + View
Prunus persica Prupe.5G229200 Pp05 - View
Phaseolus vulgaris Phvul.002G327100 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Chr02 - View
Quercus lobata QL10p027384 10 - View
Rosa chinensis RcHm_v2.0_Chr7g0178871 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim12G0140200 chr12 + View
Sechium edule Sed0018744 LG08 - View
Sechium edule Sed0003870 LG01 - View
Solanum lycopersicum Solyc06g069020.4 Elongation factor (AHRD V3.3 *** A0A200PY18_9MAGN) SL4.0ch06 + View
Solanum lycopersicum Solyc03g118980.2 Elongation factor 1-alpha C (AHRD V3.3 *-* A0A2I0VCV4_9ASPA) SL4.0ch03 - View
Schrenkiella parvula Sp1g16090 K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) ch1-1 - View
Solanum tuberosum PGSC0003DMG400005660 Eukaryotic peptide chain release factor GTP-binding subunit ST4.03ch03 - View
Theobroma cacao Thecc.03G049400 Translation elongation factor EF1A/initiation factor IF2gamma family protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104812160 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like NW_010965372.1 - View
Tarenaya hassleriana THA.LOC104813913 eukaryotic peptide chain release factor GTP-binding subunit ERF3A NW_010965373.1 - View
Trifolium pratense TPR.G12926 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI60G0475 NC_052246.1 - View
Vaccinium macrocarpon vmacro16427 Similar to GSPT1: Eukaryotic peptide chain release factor GTP-binding subunit ERF3A (Homo sapiens OX%3D9606) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3634 CM024069.1 - View