Gene: AT1G18070

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G18070
  • Transcript Identifier AT1G18070.1
  • Gene Type Coding gene
  • Location Chr1 : 6214236-6218211 : negative

Gene Family Information

  • ID HOM05D000280
  • #Genes/#Species 1564/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G18070.1
  • uniprot Q8L835

Descriptions

  • Description Translation elongation factor EF1A/initiation factor IF2gamma family protein
  • Computational description Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation release factor activity, GTPase activity; INVOLVED IN: translational termination; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Yeast eukaryotic release factor (InterPro:IPR003285); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3); Has 80701 Blast hits to 80623 proteins in 18440 species: Archae - 844; Bacteria - 33853; Metazoa - 20485; Fungi - 12327; Plants - 1789; Viruses - 3; Other Eukaryotes - 11400 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006415
IEA
Gene Ontologytranslational termination
GO:0006415
IEA
InterProtranslational termination
GO:0000288
IEA
Gene Ontologynuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000288
IEA
InterPronuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0002184
IBA
Gene Ontologycytoplasmic translational termination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IBA
IEA
Gene OntologyGTPase activity1
GO:0003924
IEA
InterProGTPase activity
GO:0003747
IBA
IEA
Gene Ontologytranslation release factor activity1
GO:0003747
IEA
InterProtranslation release factor activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0003746
IEA
GOA Databasetranslation elongation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018444
IBA
Gene Ontologytranslation release factor complex1
GO:0005634
HDA
Gene Ontologynucleus2
GO:0000325
HDA
Gene Ontologyplant-type vacuole3
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR003285 Eukaryotic peptide chain release factor GTP-binding subunit
IPR000795 Translational (tr)-type GTP-binding domain
IPR009000 Translation protein, beta-barrel domain superfamily
Mapman id Description
17.3.2.1.2 Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.eRF1-eRF3 aberrant mRNA detection complex.GTPase component eRF3