Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen03g007800 Translation protein SH3-like family protein | FUNCTIONS IN: structural constituent of ribosome, protein binding | INVOLVED IN: translation | LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translation protein SH3-like , Ribosomal protein L26, eukaryotic/archaeal , Ribosomal protein L24, SH3-like , Ribosomal protein L24/L26, conserved site , KOW | BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein Spenn-ch03 + View
Sopen02g014760 Translation protein SH3-like family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: response to cold, translation | LOCATED IN: in 8 components | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translation protein SH3-like , Ribosomal protein L26, eukaryotic/archaeal , Ribosomal protein L24, SH3-like , Ribosomal protein L24/L26, conserved site , KOW | BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein Spenn-ch02 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G18360 LG-4 + View
Aethionema arabicum Aa31LG6G14540 LG-6 - View
Acer truncatum Atru.chr3.139 chr3 + View
Actinidia chinensis Actinidia36433 Lachesis_group4 + View
Actinidia chinensis Actinidia32838 Lachesis_group8 - View
Arabidopsis lyrata AL5G29920 scaffold_5 + View
Arabidopsis lyrata AL8G43790 scaffold_8 + View
Avicennia marina MSTRG.23674 ScioBoG_3895_HRSCAF_3912 + View
Avicennia marina MSTRG.2820 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.15354 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.03g140510 AmaHy_arrow1_Scaffold_3 - View
Amaranthus hybridus Ah.02g125430 60S ribosomal protein L26-1 AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy6G02634 CHR06 + View
Aquilegia oxysepala Aqoxy5G00874 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K0XUKT K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QE9DNI K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT3G49910 Translation protein SH3-like family protein Translation protein SH3-like family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: response to cold%2C translation%3B LOCATED IN: in 8 components%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991)%2C Ribosomal protein L26%2C eukaryotic/archaeal (InterPro:IPR005756)%2C Ribosomal protein L24%2C SH3-like (InterPro:IPR014723)%2C Ribosomal protein L24/L26%2C conserved site (InterPro:IPR005825)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1)%3B Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314%3B Bacteria - 5%3B Metazoa - 375%3B Fungi - 141%3B Plants - 96%3B Viruses - 0%3B Other Eukaryotes - 182 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G67510 Translation protein SH3-like family protein Translation protein SH3-like family protein%3B FUNCTIONS IN: structural constituent of ribosome%2C protein binding%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic ribosome%2C cytosolic large ribosomal subunit%2C large ribosomal subunit%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991)%2C Ribosomal protein L26%2C eukaryotic/archaeal (InterPro:IPR005756)%2C Ribosomal protein L24%2C SH3-like (InterPro:IPR014723)%2C Ribosomal protein L24/L26%2C conserved site (InterPro:IPR005825)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT3G49910.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB05g23175 ChrB05 + View
Brassica carinata BcaC09g49983 ChrC09 + View
Brassica napus C01p30400 C01 - View
Brassica napus A01p24380 A01 - View
Brassica napus A09p43050 A09 + View
Brassica napus C08p24940 C08 + View
Brassica napus C07p45570 C07 + View
Brassica oleracea BolC7t45078H C7 + View
Brassica oleracea BolC1t02983H C1 - View
Brassica oleracea BolC8t50112H C8 + View
Brassica rapa BraA03t13872Z A03 + View
Brassica rapa BraA01t02351Z A01 - View
Beta vulgaris EL10Ac6g15625 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0020281 Translation protein SH3-like family protein [Theobroma cacao] Chr2 + View
Camellia sinensis var. sinensis CSS0019871 Translation protein SH3-like family protein [Theobroma cacao] Chr1 - View
Capsicum annuum CAN.G1075.31 PGAv.1.6.scaffold1075 - View
Cannabis sativa CANSAT01G2791 NC_044373.1 + View
Cicer arietinum L. Ca_24697_v3 Ca_LG8_v3 + View
Corylus avellana Haze_15288 Similar to RPL26A: 60S ribosomal protein L26-1 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc07_g07050 60S ribosomal protein L26-1 chr7 - View
Citrus clementina Ciclev10026719m.g scaffold_7 + View
Carpinus fangiana Cfa004127 Cfa01 - View
Cardamine hirsuta CARHR159000 60S ribosomal protein L26 Chr5 + View
Cardamine hirsuta CARHR280080 60S ribosomal protein L26 Chr8 + View
Carya illinoinensis CiPaw.01G005000 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Chr01 + View
Carya illinoinensis CiPaw.02G002700 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Chr02 + View
Cucumis melo MELO3C007635.2 60S ribosomal protein L26-1 chr08 + View
Chenopodium quinoa AUR62004002 RPL26A: 60S ribosomal protein L26-1 C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62040244 RPL26A: 60S ribosomal protein L26-1 C_Quinoa_Scaffold_4447 + View
Capsella rubella Carub.0008s2696 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) scaffold_8 + View
Capsella rubella Carub.0005s1627 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) scaffold_5 + View
Cucumis sativus L. CsaV3_6G044130 60S ribosomal protein L26 chr6 + View
Davidia involucrata Dinv26925 GWHABJS00000014 - View
Davidia involucrata Dinv04053 GWHABJS00000021 - View
Durio zibethinus Duzib264G1105 NW_019167960.1 + View
Durio zibethinus Duzib147G0543 NW_019168470.1 + View
Durio zibethinus Duzib187G0203 NW_019167860.1 + View
Eucalyptus grandis Eucgr.I00708 Chr09 - View
Erythranthe guttata Migut.H00351 scaffold_8 + View
Erythranthe guttata Migut.L00214 scaffold_12 - View
Eutrema salsugineum Thhalv10026503m.g K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) scaffold_1 + View
Eutrema salsugineum Thhalv10005678m.g K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) scaffold_6 - View
Eutrema salsugineum Thhalv10010974m.g K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) scaffold_16 - View
Fragaria x ananassa FAN23G0272 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Fvb1-3 - View
Fragaria x ananassa FAN28G0126 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Fvb1-1 + View
Fragaria x ananassa FAN19G0063 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Fvb1-4 - View
Fragaria x ananassa FAN26G3269 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Fvb1-2 - View
Fragaria vesca FvH4_1g17640 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Fvb1 - View
Gossypium hirsutum Gohir.D03G028500 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) D03 - View
Gossypium hirsutum Gohir.A02G151900 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) A02 + View
Gossypium hirsutum Gohir.D11G208100 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) D11 - View
Gossypium hirsutum Gohir.A10G089700 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) A10 + View
Gossypium hirsutum Gohir.A11G215200 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) A11 + View
Gossypium hirsutum Gohir.D11G052100 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) D11 - View
Gossypium hirsutum Gohir.A11G048500 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) A11 - View
Gossypium hirsutum Gohir.D10G098400 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) D10 - View
Glycine max Glyma.01G193800 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Gm01 - View
Glycine max Glyma.11G048100 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Gm11 + View
Gossypium raimondii Gorai.007G223100 Chr07 - View
Gossypium raimondii Gorai.011G108100 Chr11 - View
Gossypium raimondii Gorai.003G030000 Chr03 - View
Gossypium raimondii Gorai.007G056500 Chr07 - View
Hydrangea macrophylla Hma1.2p1_0808F.1_g221590 Hma1.2p1_0808F.1 - View
Lupinus albus Lalb_Chr05g0213691 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0378841 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0323581 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Lalb_Chr09 - View
Lotus japonicus Lj2g0004672 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) chr2 + View
Lonicera japonica Lj7P96T38 GWHAAZE00000007 - View
Lonicera japonica Lj4P162T69 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_4_160720 PTHR11143 - 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER Lsat_1_v8_lg_4 + View
Malus domestica MD02G1185200 Translation protein SH3-like family protein Chr02 - View
Manihot esculenta Manes.12G113600 Chromosome12 - View
Manihot esculenta Manes.13G112100 Chromosome13 + View
Medicago truncatula Medtr5g015570 60S ribosomal protein L26-1 chr5 + View
Nicotiana tabacum Nitab4.5_0001417g0070 Ribosomal protein L2 domain 2, Ribosomal protein L26/L24P, eukaryotic/archaeal, Ribosomal protein L24/L26, conserved site, KOW, Translation protein SH3-like domain Nitab4.5_0001417 - View
Nicotiana tabacum Nitab4.5_0000036g0020 Translation protein SH3-like domain, Ribosomal protein L26/L24P, eukaryotic/archaeal, Ribosomal protein L2 domain 2, KOW, Ribosomal protein L24/L26, conserved site Nitab4.5_0000036 - View
Nicotiana tabacum Nitab4.5_0000651g0270 Ribosomal protein L26/L24P, eukaryotic/archaeal, Ribosomal protein L2 domain 2, Translation protein SH3-like domain, Ribosomal protein L24/L26, conserved site, KOW Nitab4.5_0000651 - View
Olea europaea Oeu014244.3 chr10 - View
Petunia axillaris Peaxi162Scf00449g00023 60S ribosomal protein L26-1 Peaxi162Scf00449 - View
Petunia axillaris Peaxi162Scf00548g00066 60S ribosomal protein L26-1 Peaxi162Scf00548 + View
Punica granatum PGR004G1686 NC_045131.1 - View
Prunus persica Prupe.6G221600 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Pp06 + View
Pisum sativum Psat2g171400 Ribosomal proteins L26 eukaryotic + L24P archaeal chr2LG1 - View
Papaver somniferum PSO675G5091 NC_039358.1 + View
Papaver somniferum PSO541G4562 NC_039363.1 + View
Populus trichocarpa Potri.007G055900 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Chr07 - View
Phaseolus vulgaris Phvul.002G011100 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Chr02 + View
Rosa chinensis RcHm_v2.0_Chr2g0107961 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0093900 chr08 + View
Rhododendron simsii Rhsim10G0099800 chr10 + View
Striga asiatica SGA_v2.0_scaffold15G07452 scaffold15 - View
Salvia bowleyana SalBow5G4771 GWHASIU00000003 - View
Salvia bowleyana SalBow5G0710 GWHASIU00000003 - View
Salix brachista Sabra07G0048100 GWHAAZH00000007 - View
Simmondsia chinensis Sc03g0002380 GWHAASQ00000003 - View
Simmondsia chinensis Sc07g0000550 GWHAASQ00000007 + View
Sechium edule Sed0027797 LG01 - View
Sechium edule Sed0012543 LG10 + View
Solanum lycopersicum Solyc02g064670.1 60S ribosomal protein L26 (AHRD V3.3 *** A0A1U8FHZ3_CAPAN) SL4.0ch02 + View
Solanum lycopersicum Solyc03g044000.1 60S ribosomal protein L26 (AHRD V3.3 *** A0A1U8FHZ3_CAPAN) SL4.0ch03 + View
Solanum lycopersicum Solyc02g092430.1 60S ribosomal protein L26 (AHRD V3.3 *** A0A1U8FHZ3_CAPAN) SL4.0ch02 + View
Schrenkiella parvula Sp2g29140 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) ch2-4 + View
Schrenkiella parvula Sp5g12200 K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) ch5-1 - View
Solanum tuberosum PGSC0003DMG400035337 L24 ribosomal protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400021420 L24 ribosomal protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400009063 L24 ribosomal protein ST4.03ch03 + View
Trochodendron aralioides TAR381G0356 group11 - View
Theobroma cacao Thecc.01G072100 Translation protein SH3-like family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807631 60S ribosomal protein L26-1-like NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104819264 60S ribosomal protein L26-1 NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104819880 60S ribosomal protein L26-1-like NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104827589 60S ribosomal protein L26-1-like NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104804208 60S ribosomal protein L26-1-like NW_010971389.1 - View
Tarenaya hassleriana THA.LOC104821199 60S ribosomal protein L26-1-like NW_010966459.1 - View
Trifolium pratense TPR.G34853 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI09G1241 NC_052245.1 - View
Tripterygium wilfordii TWI73G0037 NC_052232.1 + View
Vigna mungo VMungo1215G1338 CM024074.1 + View
Vitis vinifera GSVIVG01000114001 chr7 + View