Gene: Sopen02g014760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g014760
  • Transcript Identifier Sopen02g014760.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 38690033-38690473 : positive

Gene Family Information

  • ID HOM05D002190
  • #Genes/#Species 306/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g014760.1

Descriptions

  • Description Translation protein SH3-like family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: response to cold, translation | LOCATED IN: in 8 components | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translation protein SH3-like , Ribosomal protein L26, eukaryotic/archaeal , Ribosomal protein L24, SH3-like , Ribosomal protein L24/L26, conserved site , KOW | BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G49910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G67510
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G49910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015934
IEA
InterProlarge ribosomal subunit
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G49910
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G67510
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G49910
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT5G67510
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G49910
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G49910
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G49910
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT5G67510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005756 Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 KOW
IPR008991 Translation protein SH3-like domain superfamily
IPR014722 Ribosomal protein L2, domain 2
IPR041988 Ribosomal protein L26/L24, KOW domain
Mapman id Description
17.1.2.1.26 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL26