Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc06g076040.3 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WNK7_CAPBA) SL4.0ch06 - View
Solyc11g008390.2 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8EX65_CAPAN) SL4.0ch11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7370 LG-5 + View
Acer truncatum Atru.chr3.3861 chr3 - View
Acer truncatum Atru.chr12.836 chr12 + View
Actinidia chinensis Actinidia33864 Lachesis_group15 + View
Actinidia chinensis Actinidia26458 Lachesis_group17 - View
Arabidopsis lyrata AL4G23370 scaffold_4 - View
Arabidopsis lyrata AL5G25380 scaffold_5 - View
Amaranthus hybridus Ah.08g219330 U-box domain-containing protein 13 (EC 2.3.2.27) (Plant U-box protein 13) (RING-type E3 ubiquitin transferase PUB13) AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy1G01161 CHR01 - View
Aquilegia oxysepala Aqoxy4G02947 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T97E99 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P99R0P PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H1DAXK PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT3G46510 plant U-box 13 Encodes a protein containing a UND%2C a U-box%2C and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK%2C ARK1%2C and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2. plant U-box 13 (PUB13)%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1)%3B Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6%3B Bacteria - 52%3B Metazoa - 2498%3B Fungi - 809%3B Plants - 4013%3B Viruses - 3%3B Other Eukaryotes - 927 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB06g28256 ChrB06 - View
Brassica carinata BcaC02g08131 ChrC02 + View
Brassica napus C04p58040 C04 - View
Brassica napus A04p21900 A04 - View
Brassica oleracea BolC4t27330H C4 - View
Brassica rapa BraA04t17758Z A04 - View
Beta vulgaris EL10Ac7g16000 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0028812 PREDICTED: U-box domain-containing protein 13-like [Nelumbo nucifera] Chr4 - View
Camellia sinensis var. sinensis CSS0047859 PREDICTED: U-box domain-containing protein 14 [Sesamum indicum] Chr1 - View
Camellia sinensis var. sinensis CSS0019899 hypothetical protein JCGZ_05690 [Jatropha curcas] Chr4 + View
Capsicum annuum CAN.G394.51 PGAv.1.6.scaffold394 - View
Corylus avellana Haze_20768 Similar to PUB13: U-box domain-containing protein 13 (Arabidopsis thaliana OX%3D3702) 10 - View
Corylus avellana Haze_24079 Similar to PUB13: U-box domain-containing protein 13 (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g12740 U-box domain-containing protein 13 chr1 - View
Citrus clementina Ciclev10027966m.g scaffold_8 - View
Citrus clementina Ciclev10030962m.g scaffold_4 + View
Carpinus fangiana Cfa011487 Cfa04 - View
Carpinus fangiana Cfa017398 Cfa07 + View
Cardamine hirsuta CARHR121980 U-box domain-containing protein 12 Chr4 - View
Cardamine hirsuta CARHR155290 U-box domain-containing protein 13 Chr5 + View
Carya illinoinensis CiPaw.13G095700 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Chr13 + View
Carya illinoinensis CiPaw.01G269000 PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Chr01 - View
Carya illinoinensis CiPaw.09G191300 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Chr09 - View
Citrullus lanatus ClCG03G001600 U-box domain-containing protein CG_Chr03 + View
Citrullus lanatus ClCG02G020260 U-box domain-containing protein CG_Chr02 + View
Cucumis melo MELO3C013694.2 RING-type E3 ubiquitin transferase chr11 - View
Carica papaya Cpa.g.sc53.127 supercontig_53 + View
Chenopodium quinoa AUR62009592 PUB13: U-box domain-containing protein 13 C_Quinoa_Scaffold_2493 + View
Chenopodium quinoa AUR62001806 PUB13: U-box domain-containing protein 13 C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0004s0982 scaffold_4 - View
Cucumis sativus L. CsaV3_6G016960 RING-type E3 ubiquitin transferase chr6 + View
Cucumis sativus L. CsaV3_1G034080 RING-type E3 ubiquitin transferase chr1 - View
Daucus carota DCAR_005320 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv37184 GWHABJS00000021 - View
Davidia involucrata Dinv03598 GWHABJS00000007 - View
Davidia involucrata Dinv36394 GWHABJS00000009 + View
Durio zibethinus Duzib168G0280 NW_019168159.1 + View
Durio zibethinus Duzib150G1180 NW_019167882.1 - View
Durio zibethinus Duzib170G0865 NW_019167871.1 + View
Erigeron canadensis ECA247G3094 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.B02378 Chr02 + View
Eucalyptus grandis Eucgr.G02864 Chr07 - View
Eucalyptus grandis Eucgr.J02058 Chr10 + View
Eutrema salsugineum Thhalv10016364m.g scaffold_10 - View
Eutrema salsugineum Thhalv10002430m.g PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED scaffold_4 + View
Fragaria x ananassa FAN06G4777 PTHR23315//PTHR23315:SF111 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 14 Fvb7-2 - View
Fragaria x ananassa FAN25G0214 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Fvb3-1 - View
Fragaria x ananassa FAN10G0168 PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Fvb7-1 - View
Fragaria x ananassa FAN21G3938 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Fvb3-2 - View
Fragaria x ananassa FAN16G2187 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Fvb3-3 - View
Fragaria x ananassa FAN10G4298 PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Fvb7-1 - View
Fragaria x ananassa FAN03G1321 PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Fvb7-3 + View
Fragaria x ananassa FAN06G4011 PTHR23315//PTHR23315:SF111 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 14 Fvb7-2 - View
Fragaria x ananassa FAN11G1690 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Fvb3-4 + View
Fragaria vesca FvH4_3g35800 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Fvb3 - View
Fragaria vesca FvH4_7g18840 PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Fvb7 - View
Gossypium hirsutum Gohir.A07G097101 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED A07 - View
Gossypium hirsutum Gohir.A05G096300 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED A05 + View
Gossypium hirsutum Gohir.D03G126600 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED D03 + View
Gossypium hirsutum Gohir.A03G041500 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED A03 - View
Gossypium hirsutum Gohir.D07G101600 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED D07 - View
Gossypium hirsutum Gohir.D10G211500 PTHR23315//PTHR23315:SF111 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 14 D10 - View
Gossypium hirsutum Gohir.D05G096500 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED D05 + View
Glycine max Glyma.18G176350 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Gm18 - View
Glycine max Glyma.11G140100 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Gm11 + View
Glycine max Glyma.12G063700 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Gm12 + View
Gossypium raimondii Gorai.011G237300 Chr11 - View
Gossypium raimondii Gorai.001G109500 Chr01 - View
Gossypium raimondii Gorai.009G100000 Chr09 + View
Gossypium raimondii Gorai.003G133100 Chr03 + View
Helianthus annuus HanXRQChr15g0493191 Probable U-box domain-containing protein 12 HanXRQChr15 + View
Hydrangea macrophylla Hma1.2p1_0035F.1_g022300 Hma1.2p1_0035F.1 - View
Lupinus albus Lalb_Chr03g0026681 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Lalb_Chr03 + View
Lotus japonicus Lj3g0002588 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED chr3 + View
Lonicera japonica Lj1P155T13 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_23101 Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_5_168041 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI05_g22882_MAGBIO AED:0.12 Chr05 - View
Malus domestica MD03G1095900 plant U-box 13 Chr03 + View
Malus domestica MD11G1111000 plant U-box 13 Chr11 + View
Malus domestica MD07G1170400 plant U-box 14 Chr07 - View
Manihot esculenta Manes.07G133160 Chromosome07 - View
Manihot esculenta Manes.11G131500 Chromosome11 + View
Medicago truncatula Medtr4g063800 armadillo/beta-catenin repeat protein chr4 - View
Nelumbo nucifera Nn2g10387 chr2 + View
Nicotiana tabacum Nitab4.5_0001800g0110 Armadillo-type fold, Armadillo-like helical, Zinc finger, RING/FYVE/PHD-type, U box domain, Armadillo Nitab4.5_0001800 - View
Nicotiana tabacum Nitab4.5_0001304g0090 Armadillo, U box domain, Zinc finger, RING/FYVE/PHD-type, Armadillo-like helical, Armadillo-type fold Nitab4.5_0001304 - View
Nicotiana tabacum Nitab4.5_0004078g0040 U box domain, Armadillo-like helical, Armadillo-type fold, Armadillo, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0004078 - View
Oryza sativa ssp. japonica Os03g0275900 Similar to Protein spotted leaf 11. Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11). Hypothetical conserved gene. chr03 + View
Petunia axillaris Peaxi162Scf00679g00323 U-box domain-containing protein 13 Peaxi162Scf00679 - View
Punica granatum PGR102G0436 NC_045129.1 - View
Punica granatum PGR142G3096 NC_045128.1 - View
Prunus persica Prupe.6G079400 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Pp06 + View
Prunus persica Prupe.2G209300 PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Pp02 - View
Papaver somniferum PSO339G1786 NC_039366.1 - View
Papaver somniferum PSO151G0166 NW_020650971.1 + View
Populus trichocarpa Potri.009G029600 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Chr09 - View
Populus trichocarpa Potri.010G226500 PTHR23315//PTHR23315:SF111 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 14 Chr10 + View
Populus trichocarpa Potri.001G238500 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Chr01 - View
Phaseolus vulgaris Phvul.011G064700 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Chr11 + View
Quercus lobata QL08p054410 8 - View
Quercus lobata QL01p032396 1 + View
Rosa chinensis RcHm_v2.0_Chr1g0362651 RcHm_v2.0_Chr1 - View
Rosa chinensis RcHm_v2.0_Chr5g0063991 RcHm_v2.0_Chr5 - View
Salix brachista Sabra10G0174800 GWHAAZH00000010 + View
Salix brachista Sabra09G0020600 GWHAAZH00000009 - View
Salix brachista Sabra16G0143800 GWHAAZH00000016 - View
Salix brachista Sabra08G0023900 GWHAAZH00000008 - View
Simmondsia chinensis Sc21g0005690 GWHAASQ00000021 - View
Sechium edule Sed0016957 LG01 - View
Schrenkiella parvula Sp5g15170 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED ch5-1 + View
Solanum pennellii Sopen11g025780 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. | plant U-box 13 (PUB13) | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 Spenn-ch11 + View
Solanum pennellii Sopen11g004180 Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. | plant U-box 14 (PUB14) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: plant U-box 13 Spenn-ch11 - View
Solanum pennellii Sopen06g032450 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. | plant U-box 13 (PUB13) | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400030407 Spotted leaf protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400000396 Spotted leaf protein ST4.03ch11 + View
Selenicereus undatus Hund04977 Scaffold_19641 + View
Selenicereus undatus Hund18919 Scaffold_33675 + View
Trochodendron aralioides TAR369G0327 group18 - View
Trochodendron aralioides TAR633G2479 group2 + View
Trochodendron aralioides TAR623G0207 group7 + View
Trochodendron aralioides TAR633G0604 group2 - View
Theobroma cacao Thecc.09G323400 Plant U-box 13 Chromosome_9 + View
Theobroma cacao Thecc.10G082800 U-box domain-containing protein 14 Chromosome_10 + View
Tarenaya hassleriana THA.LOC104810786 U-box domain-containing protein 13 NW_010965304.1 + View
Trifolium pratense TPR.G14485 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI75G0231 NC_052253.1 + View
Tripterygium wilfordii TWI15G0314 NC_052247.1 - View
Tripterygium wilfordii TWI31G0784 NC_052233.1 + View
Vaccinium macrocarpon vmacro04844 Similar to PUB14: U-box domain-containing protein 14 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20141 Similar to PUB13: U-box domain-containing protein 13 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G2015 CM024076.1 + View
Vitis vinifera GSVIVG01024985001 chr6 - View
Zea mays Zm00001eb136450 Zm00001e018161 U-box domain-containing protein 13 3 + View