Gene: Sopen06g032450
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g032450
- Transcript Identifier Sopen06g032450.1
- Gene Type Coding gene
- Location Spenn-ch06 : 58129988-58134456 : negative
Gene Family Information
- ID HOM05D000215
- #Genes/#Species 1875/100
- Phylogenetic origin
- ID ORTHO05D001676
- #Genes/#Species 371/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen06g032450.1
Descriptions
- Description Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. | plant U-box 13 (PUB13) | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007166 | IEA | InterPro | cell surface receptor signaling pathway | |
| GO:0016567 | IEA | InterPro | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.2.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase |