Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc10g083250.2 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_TOBAC) SL4.0ch10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G7160 LG-11 + View
Aethionema arabicum Aa31LG5G21240 LG-5 - View
Acer truncatum Atru.chr3.3174 chr3 - View
Acer truncatum Atru.chr8.1442 chr8 - View
Acer truncatum Atru.chr8.292 chr8 + View
Actinidia chinensis Actinidia05400 Lachesis_group5 + View
Arabidopsis lyrata AL4G32190 scaffold_4 - View
Arabidopsis lyrata AL3G23100 scaffold_3 + View
Aquilegia oxysepala Aqoxy4G02723 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZXWJ3N PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QSCB87 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT3G11550 Uncharacterized protein family (UPF0497) Uncharacterised protein family (UPF0497)%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%2C Uncharacterised protein family UPF0497%2C trans-membrane plant subgroup (InterPro:IPR006459)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G06200.1)%3B Has 610 Blast hits to 610 proteins in 22 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 608%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G36100 Uncharacterized protein family (UPF0497) Uncharacterised protein family (UPF0497)%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%2C Uncharacterised protein family UPF0497%2C trans-membrane plant subgroup (InterPro:IPR006459)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G11550.1)%3B Has 599 Blast hits to 599 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 599%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0820G292 AmTr_v1.0_scaffold00040 + View
Brassica carinata BcaB04g18648 ChrB04 + View
Brassica carinata BcaB02g09383 ChrB02 + View
Brassica carinata BcaC02g07627 ChrC02 - View
Brassica carinata BcaB06g25609 ChrB06 - View
Brassica carinata BcaC01g04106 ChrC01 - View
Brassica napus A05p37780 A05 - View
Brassica napus C03p45010 C03 + View
Brassica napus C04p12080 C04 + View
Brassica napus A05p09700 A05 + View
Brassica napus C05p56400 C05 - View
Brassica oleracea BolC3t14733H C3 - View
Brassica oleracea BolC3t16761H C3 + View
Brassica oleracea BolC4t22849H C4 + View
Brassica oleracea BolC5t34307H C5 - View
Brassica rapa BraA05t19926Z A05 + View
Brassica rapa BraA05t22573Z A05 - View
Brassica rapa BraA03t12876Z A03 + View
Beta vulgaris EL10Ac7g16868 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0025162 PREDICTED: casparian strip membrane protein 1-like [Solanum tuberosum] Chr4 - View
Cannabis sativa CANSAT64G0145 NC_044379.1 + View
Corylus avellana Haze_19654 Similar to RCOM_1259250: Casparian strip membrane protein 1 (Ricinus communis OX%3D3988) 10 + View
Coffea canephora Cc06_g06190 Casparian strip membrane protein 1 chr6 + View
Citrus clementina Ciclev10013511m.g scaffold_6 - View
Ceratophyllum demersum CDE08G1184 6 + View
Ceratophyllum demersum CDE06G0644 4 - View
Carpinus fangiana Cfa016648 Cfa07 + View
Cardamine hirsuta CARHR206900 Casparian strip membrane protein 4 Chr6 + View
Cardamine hirsuta CARHR130330 Casparian strip membrane protein 1 Chr4 - View
Cardamine hirsuta CARHR086100 Casparian strip membrane protein 2 Chr3 + View
Carya illinoinensis CiPaw.10G012500 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Chr10 + View
Carya illinoinensis CiPaw.09G017400 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Chr09 + View
Citrullus lanatus ClCG04G010220 Casparian strip membrane protein 1 CG_Chr04 + View
Citrullus lanatus ClCG10G018710 Casparian strip membrane protein 1 CG_Chr10 - View
Cucumis melo MELO3C009495.2 CASP-like protein chr04 - View
Cucumis melo MELO3C024564.2 CASP-like protein chr08 - View
Corchorus olitorius COL.COLO4_29669 hypothetical protein AWUE01020390.1 - View
Carica papaya Cpa.g.sc104.91 supercontig_104 - View
Chenopodium quinoa AUR62006229 RCOM_1282030: Casparian strip membrane protein 3 C_Quinoa_Scaffold_1001 + View
Chenopodium quinoa AUR62036981 RCOM_1282030: Casparian strip membrane protein 3 C_Quinoa_Scaffold_1847 - View
Capsella rubella Carub.0004s1784 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED scaffold_4 - View
Capsella rubella Carub.0006s0507 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED scaffold_6 + View
Capsella rubella Carub.0003s1087 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_6G040860 CASP-like protein chr6 + View
Cucumis sativus L. CsaV3_3G037520 CASP-like protein chr3 + View
Daucus carota DCAR_013414 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv21166 GWHABJS00000021 - View
Davidia involucrata Dinv31722 GWHABJS00000015 + View
Durio zibethinus Duzib106G1986 NW_019168492.1 - View
Durio zibethinus Duzib093G1226 NW_019167937.1 - View
Durio zibethinus Duzib128G1833 NW_019168481.1 - View
Eucalyptus grandis Eucgr.A02631 Chr01 - View
Eucalyptus grandis Eucgr.K02571 Chr11 - View
Erythranthe guttata Migut.L01803 scaffold_12 + View
Erythranthe guttata Migut.J01000 scaffold_10 - View
Eutrema salsugineum Thhalv10017241m.g PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED scaffold_10 - View
Eutrema salsugineum Thhalv10015967m.g PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10021542m.g PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED scaffold_13 - View
Fragaria x ananassa FAN02G2129 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Fvb6-4 + View
Fragaria x ananassa FAN09G0569 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Fvb6-2 - View
Fragaria x ananassa FAN05G0488 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Fvb6-3 + View
Fragaria x ananassa FAN14G5651 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Fvb6-1 - View
Fragaria vesca FvH4_6g19500 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Fvb6 + View
Glycine max Glyma.10G075400 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Gm10 + View
Glycine max Glyma.02G200900 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Gm02 - View
Gossypium raimondii Gorai.009G399600 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0769F.1_g215680 Hma1.2p1_0769F.1 - View
Lupinus albus Lalb_Chr06g0172491 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Lalb_Chr06 - View
Lonicera japonica Lj2A143T30 GWHAAZE00000002 + View
Magnolia biondii MBI17_g24518_MAGBIO AED:0.20 Chr17 - View
Malus domestica MD11G1168200 Uncharacterised protein family (UPF0497) Chr11 + View
Malus domestica MD03G1149400 Uncharacterised protein family (UPF0497) Chr03 + View
Malus domestica MD12G1031100 Uncharacterised protein family (UPF0497) Chr12 + View
Malus domestica MD14G1031600 Uncharacterised protein family (UPF0497) Chr14 + View
Manihot esculenta Manes.09G051900 Chromosome09 - View
Manihot esculenta Manes.08G028500 Chromosome08 + View
Medicago truncatula Medtr1g058540 casparian strip membrane protein chr1 - View
Nelumbo nucifera Nn6g34809 chr6 - View
Nelumbo nucifera Nn2g14226 chr2 + View
Nicotiana tabacum Nitab4.5_0001933g0090 Uncharacterised protein family UPF0497, trans-membrane plant, Uncharacterised protein family UPF0497, trans-membrane plant subgroup Nitab4.5_0001933 + View
Nicotiana tabacum Nitab4.5_0000573g0100 Uncharacterised protein family UPF0497, trans-membrane plant, Uncharacterised protein family UPF0497, trans-membrane plant subgroup Nitab4.5_0000573 + View
Olea europaea Oeu047836.1 chr11 - View
Petunia axillaris Peaxi162Scf00129g00021 Unknown protein Peaxi162Scf00129 - View
Punica granatum PGR142G0247 NC_045128.1 + View
Punica granatum PGR004G1895 NC_045131.1 - View
Prunus persica Prupe.7G101300 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Pp07 - View
Papaver somniferum PSO339G2361 NC_039366.1 - View
Papaver somniferum PSO384G2571 NC_039368.1 + View
Populus trichocarpa Potri.006G208800 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Chr06 - View
Quercus lobata QL07p038130 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0474831 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim03G0069900 chr03 - View
Salvia bowleyana SalBow3G3158 GWHASIU00000006 - View
Salix brachista Sabra06G0160600 GWHAAZH00000006 - View
Salix brachista Sabra16G0077800 GWHAAZH00000016 - View
Simmondsia chinensis Sc20g0006440 GWHAASQ00000020 + View
Sechium edule Sed0009594 LG14 - View
Schrenkiella parvula Sp3g09790 PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED ch3-1 + View
Schrenkiella parvula Sp4g18330 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED ch4-6 - View
Schrenkiella parvula Sp6g36690 PTHR11615//PTHR11615:SF116 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED ch6-6 - View
Solanum pennellii Sopen09g004940 Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) Spenn-ch09 - View
Solanum pennellii Sopen10g032730 Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400008859 UPF0497 membrane protein 9 ST4.03ch09 + View
Selenicereus undatus Hund19894 Scaffold_33673 - View
Theobroma cacao Thecc.05G095700 Casparian strip membrane protein RCOM_1259260 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104824537 casparian strip membrane protein 1-like NW_010966881.1 + View
Tripterygium wilfordii TWI77G0537 NC_052236.1 - View
Vaccinium macrocarpon vmacro07435 Similar to Casparian strip membrane protein 1 (Cynara cardunculus var. scolymus OX%3D59895) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01036085001 chr6 + View
Vitis vinifera GSVIVG01033894001 chr8 - View