Gene: Sopen09g004940
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g004940
- Transcript Identifier Sopen09g004940.1
- Gene Type Coding gene
- Location Spenn-ch09 : 3704510-3705774 : negative
Gene Family Information
- ID HOM05D000748
- #Genes/#Species 779/92
- Phylogenetic origin
- ID ORTHO05D000394
- #Genes/#Species 1005/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g004940.1
Descriptions
- Description Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007043 | ISO | PLAZA Integrative Orthology | cell-cell junction assembly | AT2G36100 |
| GO:0042545 | ISO | PLAZA Integrative Orthology | cell wall modification | AT2G36100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G36100 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT2G36100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048226 | ISO | PLAZA Integrative Orthology | Casparian strip | AT2G36100 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G36100 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.10.3 | Cell wall organisation.Casparian strip formation.lignin polymerization scaffold protein (CASP) |