Gene: Solyc09g010200.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc09g010200.4
- Transcript Identifier Solyc09g010200.4.1
- Gene Type Coding gene
- Location SL4.0ch09 : 3621020-3622855 : negative
Gene Family Information
- ID HOM05D000748
- #Genes/#Species 779/92
- Phylogenetic origin
- ID ORTHO05D000394
- #Genes/#Species 1005/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc09g010200.4.1
- uniprot A0A3Q7HXD8
- gene_id Solyc09g010200
Descriptions
- Description Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_TOBAC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042545 | IBA | GOA Database | cell wall modification | |
| GO:0007043 | IBA | GOA Database | cell-cell junction assembly | |
| GO:0035264 | ISO | PLAZA Integrative Orthology | multicellular organism growth | Os05g0245300 |
| GO:0009826 | ISO | PLAZA Integrative Orthology | unidimensional cell growth | Os05g0245300 |
| GO:0009741 | ISO | PLAZA Integrative Orthology | response to brassinosteroid | Os05g0245300 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Os05g0245300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051539 | IBA | GOA Database | 4 iron, 4 sulfur cluster binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G36100 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT2G36100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005886 | IBA IEA | GOA Database | plasma membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0048226 | IBA | GOA Database | Casparian strip |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.10.3 | Cell wall organisation.Casparian strip formation.lignin polymerization scaffold protein (CASP) |