Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc12g006320.3 RNA helicase DEAD35 SL4.0ch12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G8880 LG-8 + View
Arabidopsis lyrata AL3G36580 scaffold_3 + View
Avicennia marina MSTRG.12266 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.14108 ScioBoG_18782_HRSCAF_18867 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L46XKT PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT3G22310 putative mitochondrial RNA helicase 1 Sequence similarity ot DEAD-box RNA helicases. Binds RNA and DNA. Involved in drought%2C salt and cold stress responses. putative mitochondrial RNA helicase 1 (PMH1)%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1)%3B Has 154573 Blast hits to 81509 proteins in 3841 species: Archae - 1406%3B Bacteria - 64973%3B Metazoa - 34940%3B Fungi - 12014%3B Plants - 11424%3B Viruses - 1269%3B Other Eukaryotes - 28547 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g28082 ChrC05 - View
Brassica carinata BcaB04g20525 ChrB04 - View
Brassica carinata BcaB06g26335 ChrB06 + View
Brassica napus C01p41940 C01 - View
Brassica napus A01p32850 A01 - View
Brassica napus A05p26460 A05 - View
Brassica napus C05p41050 C05 - View
Brassica napus A03p42850 A03 + View
Brassica oleracea BolC1t04150H C1 - View
Brassica rapa BraA05t21519Z A05 - View
Brassica rapa BraA01t03408Z A01 - View
Capsicum annuum CAN.G1664.5 PGAv.1.6.scaffold1664 + View
Cannabis sativa CANSAT64G0726 NC_044379.1 - View
Cicer arietinum L. Ca_06227_v3 Ca_LG2_v3 + View
Corylus avellana Haze_08907 Similar to RH48: Probable DEAD-box ATP-dependent RNA helicase 48 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g00550 Predicted protein chr5 - View
Cardamine hirsuta CARHR098210 ATP-dependent RNA helicase Chr3 + View
Citrullus lanatus ClCG11G016670 ATP-dependent RNA helicase CG_Chr11 + View
Cucumis melo MELO3C026389.2 DEAD-box ATP-dependent RNA helicase 53 chr07 + View
Capsella rubella Carub.0003s2248 PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_4G032180 ATP-dependent RNA helicase chr4 + View
Daucus carota DCAR_013331 hypothetical protein DCARv2_Chr4 - View
Durio zibethinus Duzib213G0943 NW_019167993.1 + View
Eucalyptus grandis Eucgr.K01327 Chr11 + View
Eutrema salsugineum Thhalv10020290m.g PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED scaffold_13 - View
Fragaria x ananassa FAN14G0790 PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Fvb6-1 + View
Fragaria x ananassa FAN02G1324 PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Fvb6-4 - View
Fragaria x ananassa FAN09G4090 PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Fvb6-2 + View
Fragaria vesca FvH4_6g40140 PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Fvb6 - View
Glycine max Glyma.14G033400 PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Gm14 - View
Glycine max Glyma.18G116700 PTHR24031//PTHR24031:SF296 - RNA HELICASE // SUBFAMILY NOT NAMED Gm18 - View
Glycine max Glyma.02G281200 PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Gm02 + View
Lotus japonicus Lj6g0027877 PTHR24031//PTHR24031:SF296 - RNA HELICASE // SUBFAMILY NOT NAMED chr6 - View
Lotus japonicus LjContig00049g0000974 PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Contig00049 - View
Malus domestica MD09G1134900 putative mitochondrial RNA helicase 2 Chr09 + View
Malus domestica MD17G1123900 putative mitochondrial RNA helicase 1 Chr17 + View
Medicago truncatula Medtr5g090120 DEAD-box ATP-dependent RNA helicase-like protein chr5 + View
Nicotiana tabacum Nitab4.5_0001843g0150 P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, Helicase, superfamily 1/2, ATP-binding domain, RNA helicase, DEAD-box type, Q motif Nitab4.5_0001843 + View
Nicotiana tabacum Nitab4.5_0006724g0040 P-loop containing nucleoside triphosphate hydrolase, Helicase, superfamily 1/2, ATP-binding domain, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, RNA helicase, DEAD-box type, Q motif, Helicase, C-terminal Nitab4.5_0006724 - View
Olea europaea Oeu056844.1 scaffold732 + View
Petunia axillaris Peaxi162Scf00351g00625 DEAD-box ATP-dependent RNA helicase 53 Peaxi162Scf00351 - View
Petunia axillaris Peaxi162Scf00047g02240 DEAD-box ATP-dependent RNA helicase 53 Peaxi162Scf00047 - View
Prunus persica Prupe.3G191800 PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Pp03 - View
Populus trichocarpa Potri.006G024100 K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21) Chr06 - View
Phaseolus vulgaris Phvul.008G199700 PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Chr08 - View
Rosa chinensis RcHm_v2.0_Chr2g0154771 RcHm_v2.0_Chr2 - View
Striga asiatica SGA_v2.0_scaffold49G18385 scaffold49 + View
Salix brachista Sabra06G0017600 GWHAAZH00000006 - View
Salix brachista Sabra16G0029300 GWHAAZH00000016 - View
Salix brachista Sabra16G0022900 GWHAAZH00000016 + View
Sechium edule Sed0018801 LG05 + View
Schrenkiella parvula Sp3g20100 PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED ch3-1 + View
Solanum pennellii Sopen12g002280 DEAD-box protein required for efficient group II intron splicing in mitochondria. | putative mitochondrial RNA helicase 2 (PMH2) | FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding | INVOLVED IN: response to cold, Group II intron splicing | LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex | EXPRESSED IN: guard cell | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) Spenn-ch12 - View
Solanum pennellii Sopen07g023350 DEAD-box protein required for efficient group II intron splicing in mitochondria. | putative mitochondrial RNA helicase 2 (PMH2) | FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding | INVOLVED IN: response to cold, Group II intron splicing | LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex | EXPRESSED IN: guard cell | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400028812 DEAD-box ATP-dependent RNA helicase 53 ST4.03ch12 + View
Tarenaya hassleriana THA.LOC104808533 DEAD-box ATP-dependent RNA helicase 53-like isoform X1 NW_010964923.1 + View
Tripterygium wilfordii TWI39G0408 NC_052250.1 + View