Gene: Sp3g20100

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp3g20100
  • Transcript Identifier Sp3g20100.1
  • Gene Type Coding gene
  • Location ch3-1 : 7244952-7247381 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp3g20100.v2.2
  • pacid 45078577

Descriptions

  • Description PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G22310
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc12g006320.3
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G22310
GO:0039694
ISO
PLAZA Integrative Orthologyviral RNA genome replication AT3G22310
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G22310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G22310
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT3G22310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G22310
GO:0019034
ISO
PLAZA Integrative Orthologyviral replication complex AT3G22310
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT3G22310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
Mapman id Description
16.11.4.2.1.4 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.RNA helicase (PMH)