Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr11.2667 | chr11 | + | View | |
Actinidia chinensis | Actinidia31689 | Lachesis_group0 | - | View | |
Actinidia chinensis | Actinidia32325 | Lachesis_group20 | - | View | |
Arabidopsis lyrata | AL5G32720 | scaffold_5 | + | View | |
Avicennia marina | MSTRG.17058 | ScioBoG_19743_HRSCAF_19834 | + | View | |
Avicennia marina | MSTRG.20609 | ScioBoG_26180_HRSCAF_26306 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.XZ4G98 | K13126 - polyadenylate-binding protein (PABPC) | arahy.Tifrunner.gnm1.Arahy.18 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.HME85M | K13126 - polyadenylate-binding protein (PABPC) | arahy.Tifrunner.gnm1.Arahy.08 | - | View |
Arabidopsis thaliana | AT3G52150 | RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast stroma%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 33 (TAIR:AT3G52380.1)%3B Has 994423 Blast hits to 498842 proteins in 22080 species: Archae - 21562%3B Bacteria - 603611%3B Metazoa - 187119%3B Fungi - 27426%3B Plants - 59617%3B Viruses - 70898%3B Other Eukaryotes - 24190 (source: NCBI BLink). | Chr3 | + | View |
Brassica oleracea | BolC7t45209H | C7 | + | View | |
Camellia sinensis var. sinensis | CSS0037404 | PREDICTED: 30S ribosomal protein 2, chloroplastic [Sesamum indicum] | Chr3 | - | View |
Corylus avellana | Haze_03246 | Similar to PSRP2: 30S ribosomal protein 2, chloroplastic (Arabidopsis thaliana OX%3D3702) | 1 | - | View |
Coffea canephora | Cc02_g27360 | Putative 30 kDa ribonucleoprotein, chloroplastic | chr2 | - | View |
Carpinus fangiana | Cfa010727 | Cfa04 | + | View | |
Cardamine hirsuta | CARHR161890 | RNA-binding protein | Chr5 | + | View |
Cucumis melo | MELO3C023523.2 | RNA-binding family protein | chr01 | + | View |
Capsella rubella | Carub.0005s1850 | K13126 - polyadenylate-binding protein (PABPC) | scaffold_5 | + | View |
Cucumis sativus L. | CsaV3_7G031350 | RNA-binding family protein | chr7 | + | View |
Davidia involucrata | Dinv43909 | GWHABJS00000020 | + | View | |
Davidia involucrata | Dinv43474 | GWHABJS00000016 | + | View | |
Eucalyptus grandis | Eucgr.J01250 | Chr10 | + | View | |
Erythranthe guttata | Migut.B01337 | scaffold_2 | - | View | |
Fragaria x ananassa | FAN06G2501 | K13126 - polyadenylate-binding protein (PABPC) | Fvb7-2 | - | View |
Fragaria x ananassa | FAN03G0216 | K13126 - polyadenylate-binding protein (PABPC) | Fvb7-3 | + | View |
Fragaria x ananassa | FAN01G0466 | Fvb7-4 | - | View | |
Fragaria x ananassa | FAN10G3986 | K13126 - polyadenylate-binding protein (PABPC) | Fvb7-1 | - | View |
Fragaria vesca | FvH4_7g00530 | K13126 - polyadenylate-binding protein (PABPC) | Fvb7 | - | View |
Glycine max | Glyma.15G271200 | KOG0105//KOG0110//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 | Gm15 | - | View |
Glycine max | Glyma.08G151700 | KOG0105//KOG0106//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | Gm08 | - | View |
Lupinus albus | Lalb_Chr25g0283261 | K13126 - polyadenylate-binding protein (PABPC) | Lalb_Chr25 | + | View |
Lotus japonicus | Lj3g0022647 | KOG0131 - Splicing factor 3b, subunit 4 | chr3 | - | View |
Lonicera japonica | Lj9A628T63 | GWHAAZE00000009 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_4_46280 | K13126 - polyadenylate-binding protein (PABPC) | Lsat_1_v8_lg_4 | - | View |
Magnolia biondii | MBI04_g27130_MAGBIO | AED:0.05 | Chr04 | + | View |
Malus domestica | MD02G1316800 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr02 | + | View |
Malus domestica | MD07G1005200 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr07 | - | View |
Manihot esculenta | Manes.10G148200 | Chromosome10 | + | View | |
Nelumbo nucifera | Nn7g36057 | chr7 | - | View | |
Prunus persica | Prupe.2G007400 | K13126 - polyadenylate-binding protein (PABPC) | Pp02 | - | View |
Populus trichocarpa | Potri.009G065900 | K13126 - polyadenylate-binding protein (PABPC) | Chr09 | + | View |
Phaseolus vulgaris | Phvul.005G039000 | KOG0131 - Splicing factor 3b, subunit 4 | Chr05 | - | View |
Salix brachista | Sabra09G0049000 | GWHAAZH00000009 | + | View | |
Trochodendron aralioides | TAR623G1428 | group7 | - | View | |
Theobroma cacao | Thecc.01G415000 | RNA-binding family protein | Chromosome_1 | - | View |
Tripterygium wilfordii | TWI73G0088 | NC_052232.1 | - | View | |
Vaccinium macrocarpon | vmacro13641 | Similar to PSRP2: 30S ribosomal protein 2, chloroplastic (Spinacia oleracea OX%3D3562) | chr7_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1080G1903 | CM024079.1 | + | View | |
Vitis vinifera | GSVIVG01032039001 | chr13 | + | View |