Gene: Potri.009G065900

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.009G065900
  • Transcript Identifier Potri.009G065900.1
  • Gene Type Coding gene
  • Location Chr09 : 6638913-6641522 : positive

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.009G065900.v4.1
  • pacid 42772570
  • synonym POPTR_0009s07030

Descriptions

  • Description K13126 - polyadenylate-binding protein (PABPC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900140
ISO
PLAZA Integrative Orthologyregulation of seedling development AT3G52150
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G52150
GO:1901001
ISO
PLAZA Integrative Orthologynegative regulation of response to salt stress AT3G52150
GO:0080148
ISO
PLAZA Integrative Orthologynegative regulation of response to water deprivation AT3G52150
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G52150
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G52150
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT3G52150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003697
ISO
PLAZA Integrative Orthologysingle-stranded DNA binding AT3G52150
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT3G52150
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G52150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G52150
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G52150
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G52150
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT3G52150
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G52150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
17.7.2.2.22 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psPSRP2