Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG2G3660 | LG-2 | - | View | |
| Aethionema arabicum | Aa31LG9G17020 | LG-9 | - | View | |
| Actinidia chinensis | Actinidia26313 | Lachesis_group3 | - | View | |
| Actinidia chinensis | Actinidia36296 | Lachesis_group4 | + | View | |
| Arabidopsis lyrata | AL7G52040 | scaffold_7 | - | View | |
| Amaranthus hybridus | Ah.10g037400 | Tryptophan synthase beta chain 2 (EC 4.2.1.20) | AmaHy_arrow1_Scaffold_10 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.D1YG1E | PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE | arahy.Tifrunner.gnm1.Arahy.14 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.WK12I4 | PTHR10314:SF21 - TRYPTOPHAN SYNTHASE BETA CHAIN | arahy.Tifrunner.gnm1.Arahy.20 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.50L6WD | K06001 - tryptophan synthase beta chain (trpB) | arahy.Tifrunner.gnm1.Arahy.10 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.Y9SFAF | PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE | arahy.Tifrunner.gnm1.Arahy.04 | + | View |
| Arabidopsis thaliana | AT5G38530 | tryptophan synthase beta type 2 TSBtype2 encodes a type 2 tryptophan synthase beta subunit that catalyzes a condensation reaction between serine and indole to generate tryptophan.It appears to form a homodimer. Its biological role has not yet been determined%2C but it has a very high affinity for indole which may be involved in allowing TSBtype2 to carefully limit free indole build-up. But%2C to date no overall change in plant morphology or seedling root growth have been observed in tsbtype2 mutants%2C indicating that this gene is not essential under optimum conditions. n most organs%2C TSBtype2 is transcripts are expressed at a lower level than TSB1 but in dry seeds they are expressed at comparable levels. tryptophan synthase beta type 2 (TSBtype2)%3B FUNCTIONS IN: pyridoxal phosphate binding%2C tryptophan synthase activity%2C catalytic activity%3B INVOLVED IN: tryptophan biosynthetic process%2C metabolic process%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme%2C beta subunit (InterPro:IPR001926)%2C Tryptophan synthase%2C beta chain-like (InterPro:IPR006316)%3B BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | + | View |
| Brassica carinata | BcaC08g44387 | ChrC08 | + | View | |
| Brassica carinata | BcaB06g27229 | ChrB06 | + | View | |
| Brassica carinata | BcaC02g09654 | ChrC02 | + | View | |
| Brassica napus | C04p45200 | C04 | + | View | |
| Brassica oleracea | BolC4t26102H | C4 | + | View | |
| Brassica oleracea | BolC6t37030H | C6 | + | View | |
| Brassica rapa | BraA04t16813Z | A04 | + | View | |
| Beta vulgaris | EL10Ac2g04631 | 4.2.1.122//4.2.1.20 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 // Tryptophan synthase / Tryptophan synthetase | Chr2_EL10_PGA_scaffold6 | - | View |
| Camellia sinensis var. sinensis | CSS0046264 | hypothetical protein POPTR_0017s14220g [Populus trichocarpa] | Chr1 | + | View |
| Cannabis sativa | CANSAT64G1963 | NC_044379.1 | - | View | |
| Citrus clementina | Ciclev10011534m.g | scaffold_6 | - | View | |
| Cardamine hirsuta | CARHR213930 | Tryptophan synthase beta chain | Chr7 | + | View |
| Chenopodium quinoa | AUR62014559 | apgM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | C_Quinoa_Scaffold_1566 | - | View |
| Chenopodium quinoa | AUR62008939 | apgM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | C_Quinoa_Scaffold_1710 | + | View |
| Capsella rubella | Carub.0007s3738 | 4.2.1.122//4.2.1.20 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 // Tryptophan synthase / Tryptophan synthetase | scaffold_7 | - | View |
| Cucumis sativus L. | CsaV3_5G038940 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | chr5 | + | View |
| Davidia involucrata | Dinv33904 | GWHABJS00000014 | + | View | |
| Davidia involucrata | Dinv34871 | GWHABJS00000012 | - | View | |
| Eucalyptus grandis | Eucgr.J01450 | Chr10 | + | View | |
| Eutrema salsugineum | Thhalv10027732m.g | 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 | scaffold_14 | - | View |
| Fragaria x ananassa | FAN09G4431 | 5.4.2.12 - Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) / Phosphoglyceromutase | Fvb6-2 | + | View |
| Fragaria x ananassa | FAN02G3769 | 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 | Fvb6-4 | - | View |
| Fragaria vesca | FvH4_6g45680 | 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 | Fvb6 | - | View |
| Glycine max | Glyma.19G042350 | PTHR10314:SF21 - TRYPTOPHAN SYNTHASE BETA CHAIN | Gm19 | - | View |
| Glycine max | Glyma.13G049500 | K06001 - tryptophan synthase beta chain (trpB) | Gm13 | - | View |
| Lotus japonicus | Lj2g0002108 | 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 | chr2 | + | View |
| Malus domestica | MD09G1080600 | Cofactor-independent phosphoglycerate mutase | Chr09 | + | View |
| Malus domestica | MD17G1071600 | Cofactor-independent phosphoglycerate mutase | Chr17 | + | View |
| Manihot esculenta | Manes.02G064400 | Chromosome02 | + | View | |
| Prunus persica | Prupe.3G243000 | K06001 - tryptophan synthase beta chain (trpB) | Pp03 | - | View |
| Pisum sativum | Psat3g192200 | 2 +3-bisphosphoglycerate-independent phosphoglycerate mutase | chr3LG5 | - | View |
| Populus trichocarpa | Potri.004G106200 | PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE | Chr04 | - | View |
| Populus trichocarpa | Potri.017G109500 | PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE | Chr17 | + | View |
| Quercus lobata | QL02p053647 | CM012294 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr2g0163831 | RcHm_v2.0_Chr2 | - | View | |
| Striga asiatica | SGA_v2.0_scaffold204G41665 | scaffold204 | - | View | |
| Salix brachista | Sabra17G0091700 | GWHAAZH00000017 | + | View | |
| Salix brachista | Sabra04G0076200 | GWHAAZH00000004 | + | View | |
| Schrenkiella parvula | Sp7g03530 | 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 | ch7-1 | - | View |
| Selenicereus undatus | Hund13744 | Scaffold_33679 | - | View | |
| Selenicereus undatus | Hund16105 | Scaffold_33677 | + | View | |
| Trochodendron aralioides | TAR374G1196 | group12 | + | View | |
| Trochodendron aralioides | TAR622G0224 | group8 | - | View | |
| Theobroma cacao | Thecc.04G144800 | Chromosome_4 | - | View | |
| Tarenaya hassleriana | THA.LOC104823868 | uncharacterized protein LOC104823868 | NW_010966881.1 | + | View |
| Tarenaya hassleriana | THA.LOC104805546 | uncharacterized protein LOC104805546 | NW_010961290.1 | + | View |
| Vaccinium macrocarpon | vmacro18096 | Similar to trpB2: Tryptophan synthase beta chain 2 (Aquifex aeolicus (strain VF5) OX%3D224324) | chr3_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vigna mungo | VMungo1383G0144 | CM024070.1 | - | View | |
| Vitis vinifera | GSVIVG01036477001 | chr14 | - | View |