Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc04g0009250 GWHAASQ00000004 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G4270 LG-1 + View
Aethionema arabicum Aa31LG2G9870 LG-2 + View
Aethionema arabicum Aa31LG7G7480 LG-7 + View
Aethionema arabicum Aa31LG11G14810 LG-11 - View
Acer truncatum Atru.chr11.2053 chr11 - View
Actinidia chinensis Actinidia08156 Lachesis_group15 - View
Actinidia chinensis Actinidia13500 Lachesis_group16 + View
Actinidia chinensis Actinidia27791 Lachesis_group10 + View
Actinidia chinensis Actinidia15055 Lachesis_group12 - View
Arabidopsis lyrata AL1G21490 scaffold_1 - View
Arabidopsis lyrata AL2G29870 scaffold_2 - View
Avicennia marina MSTRG.7906 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.13364 ScioBoG_18778_HRSCAF_18863 + View
Avicennia marina MSTRG.585 ScioBoG_102831_HRSCAF_103044 + View
Amaranthus hybridus Ah.02g129990 AmaHy_arrow1_Scaffold_2 - View
Amaranthus hybridus Ah.03g132790 AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8LVX77 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MBE7PX PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G60590 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1)%3B Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6%3B Bacteria - 1298%3B Metazoa - 151%3B Fungi - 1295%3B Plants - 1596%3B Viruses - 3%3B Other Eukaryotes - 176 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G70500 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G23460.1)%3B Has 4030 Blast hits to 4010 proteins in 486 species: Archae - 4%3B Bacteria - 1128%3B Metazoa - 14%3B Fungi - 1268%3B Plants - 1483%3B Viruses - 0%3B Other Eukaryotes - 133 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G23460 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1)%3B Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4%3B Bacteria - 1235%3B Metazoa - 14%3B Fungi - 1418%3B Plants - 1493%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G10640 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Parallel beta-helix repeat (InterPro:IPR006626)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1)%3B Has 4327 Blast hits to 4306 proteins in 507 species: Archae - 6%3B Bacteria - 1323%3B Metazoa - 14%3B Fungi - 1302%3B Plants - 1545%3B Viruses - 0%3B Other Eukaryotes - 137 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC07g38581 ChrC07 - View
Brassica carinata BcaC06g35038 ChrC06 + View
Brassica carinata BcaC07g39200 ChrC07 + View
Brassica carinata BcaC05g26265 ChrC05 + View
Brassica carinata BcaC04g22241 ChrC04 - View
Brassica carinata BcaB03g11941 ChrB03 + View
Brassica carinata BcaC05g24855 ChrC05 + View
Brassica carinata BcaC07g41809 ChrC07 + View
Brassica carinata BcaB03g14809 ChrB03 - View
Brassica carinata BcaC08g46493 ChrC08 - View
Brassica napus C04p69240 C04 - View
Brassica napus A09p41190 A09 - View
Brassica napus C08p13870 C08 - View
Brassica napus C09p21720 C09 + View
Brassica napus A09p17430 A09 + View
Brassica napus A06p07450 A06 - View
Brassica napus C08p48710 C08 + View
Brassica napus C06p44370 C06 - View
Brassica napus A08p28160 A08 - View
Brassica napus C07p35640 C07 + View
Brassica napus C08p21890 C08 + View
Brassica napus A07p36890 A07 - View
Brassica oleracea BolC8t49022H C8 - View
Brassica oleracea BolC5t30975H C5 + View
Brassica oleracea BolC6t39506H C6 - View
Brassica oleracea BolC5t29643H C5 - View
Brassica oleracea BolC8t52410H C8 + View
Brassica oleracea BolC9t55077H C9 + View
Brassica oleracea BolC7t44085H C7 + View
Brassica oleracea BolC8t49830H C8 + View
Brassica rapa BraA06t23949Z A06 - View
Brassica rapa BraA09t39613Z A09 - View
Brassica rapa BraA08t34748Z A08 - View
Brassica rapa BraA09t37370Z A09 + View
Brassica rapa BraA07t31253Z A07 - View
Brassica rapa BraA07t29141Z A07 - View
Beta vulgaris EL10Ac6g13695 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0006824 PREDICTED: polygalacturonase At1g48100-like [Citrus sinensis] Chr10 - View
Cannabis sativa CANSAT01G0946 NC_044373.1 - View
Cicer arietinum L. Ca_04584_v3 Ca_LG2_v3 - View
Corylus avellana Haze_12203 Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g15290 Putative Polygalacturonase At1g48100 chr11 - View
Carpinus fangiana Cfa009168 Cfa03 - View
Cardamine hirsuta CARHR052390 Polygalacturonase, putative Chr2 + View
Cardamine hirsuta CARHR023890 Polygalacturonase Chr1 + View
Cardamine hirsuta CARHR198670 Polygalacturonase Chr6 - View
Cardamine hirsuta CARHR010810 Polygalacturonase, putative Chr1 - View
Carya illinoinensis CiPaw.05G185500 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Chr05 - View
Carya illinoinensis CiPaw.06G070700 PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr06 + View
Citrullus lanatus ClCG10G014070 Pectin lyase-like superfamily protein LENGTH=540 CG_Chr10 + View
Citrullus lanatus ClCG05G025420 Polygalacturonase CG_Chr05 - View
Cucumis melo MELO3C010668.2 polygalacturonase At1g48100-like chr03 + View
Cucumis melo MELO3C011987.2 Polygalacturonase chr10 - View
Cucumis melo MELO3C009970.2 polygalacturonase At1g48100 chr04 + View
Carica papaya Cpa.g.sc69.65 supercontig_69 - View
Chenopodium quinoa AUR62014059 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_3035 - View
Chenopodium quinoa AUR62005397 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0002s1718 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED scaffold_2 - View
Capsella rubella Carub.0001s2303 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED scaffold_1 + View
Capsella rubella Carub.0001s1011 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN scaffold_1 - View
Capsella rubella Carub.0006s1282 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN scaffold_6 + View
Capsella rubella Carub.0002s0475 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN scaffold_2 + View
Cucumis sativus L. CsaV3_2G024660 Polygalacturonase chr2 - View
Cucumis sativus L. CsaV3_5G031360 Polygalacturonase, putative chr5 - View
Daucus carota DCAR_007081 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_026534 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_031114 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv15278 GWHABJS00000008 - View
Durio zibethinus Duzib251G0331 NW_019167971.1 - View
Durio zibethinus Duzib248G1572 NW_019168048.1 + View
Erigeron canadensis ECA233G0031 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.B03312 Chr02 - View
Erythranthe guttata Migut.E00174 scaffold_5 - View
Erythranthe guttata Migut.L01459 scaffold_12 - View
Erythranthe guttata Migut.H00099 scaffold_8 + View
Eutrema salsugineum Thhalv10013501m.g PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN scaffold_2 + View
Eutrema salsugineum Thhalv10007255m.g PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN scaffold_5 + View
Eutrema salsugineum Thhalv10019797m.g PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED scaffold_9 + View
Eutrema salsugineum Thhalv10006630m.g PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN scaffold_5 - View
Fragaria x ananassa FAN22G1107 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Fvb4-1 + View
Fragaria x ananassa FAN07G2237 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Fvb4-4 + View
Fragaria x ananassa FAN17G0975 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Fvb4-2 - View
Fragaria vesca FvH4_4g34120 PTHR31375//PTHR31375:SF14//PTHR31375:SF34//PTHR31375:SF46 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN // PECTIN LYASE-LIKE PROTEIN Fvb4 + View
Gossypium hirsutum Gohir.A01G162000 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED A01 + View
Gossypium hirsutum Gohir.D02G161250 PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN D02 + View
Gossypium hirsutum Gohir.A05G313300 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE A05 - View
Gossypium hirsutum Gohir.D04G179000 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN D04 - View
Gossypium hirsutum Gohir.D01G149400 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED D01 - View
Gossypium hirsutum Gohir.A03G138250 PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN A03 + View
Gossypium hirsutum Gohir.A04G135900 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN A04 - View
Glycine max Glyma.08G285350 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Gm08 + View
Glycine max Glyma.01G027900 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Gm01 - View
Glycine max Glyma.02G037300 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Gm02 + View
Glycine max Glyma.18G139802 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Gm18 + View
Glycine max Glyma.19G006200 K01184 - polygalacturonase (E3.2.1.15) Gm19 + View
Gossypium raimondii Gorai.012G172100 Chr12 - View
Gossypium raimondii Gorai.002G185500 Chr02 - View
Gossypium raimondii Gorai.005G181300 Chr05 + View
Helianthus annuus HanXRQChr12g0371561 Probable pectin lyase-like superfamily protein HanXRQChr12 + View
Helianthus annuus HanXRQChr08g0208661 Putative glycoside hydrolase, family 28; Pectin lyase fold/virulence factor HanXRQChr08 - View
Helianthus annuus HanXRQChr12g0383691 Probable pectin lyase-like superfamily protein HanXRQChr12 + View
Hydrangea macrophylla Hma1.2p1_0160F.1_g070990 Hma1.2p1_0160F.1 - View
Hydrangea macrophylla Hma1.2p1_0536F.1_g173870 Hma1.2p1_0536F.1 + View
Lupinus albus Lalb_Chr09g0334911 PTHR31375//PTHR31375:SF29 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN-RELATED Lalb_Chr09 + View
Lupinus albus Lalb_Chr09g0326311 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Lalb_Chr09 + View
Lupinus albus Lalb_Chr16g0392331 PTHR31375//PTHR31375:SF29 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN-RELATED Lalb_Chr16 + View
Lotus japonicus Lj4g0003274 PTHR24015//PTHR24015:SF705 - FAMILY NOT NAMED // PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN chr4 + View
Lonicera japonica Lj6A807T90 GWHAAZE00000006 - View
Lonicera japonica Lj3C1054T19 GWHAAZE00000003 - View
Malus domestica MD13G1094100 Pectin lyase-like superfamily protein Chr13 - View
Malus domestica MD16G1095400 Pectin lyase-like superfamily protein Chr16 - View
Manihot esculenta Manes.17G113400 Chromosome17 - View
Manihot esculenta Manes.13G027100 Chromosome13 - View
Manihot esculenta Manes.12G027000 Chromosome12 + View
Medicago truncatula Medtr8g065010 polygalacturonase plant-like protein chr8 - View
Nelumbo nucifera Nn4g22738 chr4 + View
Punica granatum PGR142G2289 NC_045128.1 - View
Punica granatum PGR102G3127 NC_045129.1 + View
Punica granatum PGR083G0987 NC_045133.1 - View
Punica granatum PGR119G1190 NC_045132.1 - View
Pisum sativum Psat4g124480 Glycosyl hydrolases family 28 chr4LG4 + View
Papaver somniferum PSO478G2887 NC_039361.1 - View
Populus trichocarpa Potri.010G042100 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Chr10 - View
Populus trichocarpa Potri.008G188300 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Chr08 - View
Phaseolus vulgaris Phvul.003G061600 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Chr03 - View
Quercus lobata QL03p058763 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0443631 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0115300 chr12 + View
Rhododendron simsii Rhsim12G0043800 chr12 + View
Striga asiatica SGA_v2.0_scaffold8G04204 scaffold8 + View
Striga asiatica SGA_v2.0_scaffold87G27035 scaffold87 - View
Striga asiatica SGA_v2.0_scaffold80G25703 scaffold80 + View
Salvia bowleyana SalBow8G0085 GWHASIU00000004 - View
Salix brachista Sabra08G0142600 GWHAAZH00000008 - View
Salix brachista Sabra10G0025300 GWHAAZH00000010 + View
Sechium edule Sed0018652 LG03 + View
Sechium edule Sed0022822 LG06 - View
Sechium edule Sed0013488 LG06 + View
Schrenkiella parvula Sp1g20890 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED ch1-1 + View
Schrenkiella parvula Sp2g04160 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN ch2-2 + View
Schrenkiella parvula Sp1g09330 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN ch1-1 - View
Schrenkiella parvula Sp5g25590 PTHR31375//PTHR31375:SF29 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN-RELATED ch5-6 - View
Solanum tuberosum PGSC0003DMG400013516 Polygalacturonase ST4.03ch05 - View
Selenicereus undatus Hund25361 Scaffold_3410 - View
Selenicereus undatus Hund06004 Scaffold_19641 - View
Trochodendron aralioides TAR629G3277 group0 - View
Theobroma cacao Thecc.02G253000 Pectin lyase-like superfamily protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104819411 polygalacturonase At1g48100 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104822971 probable polygalacturonase At1g80170 NW_010966822.1 - View
Tripterygium wilfordii TWI75G0467 NC_052253.1 - View
Tripterygium wilfordii TWI36G0399 NC_052237.1 - View
Tripterygium wilfordii TWI18G0738 NC_052241.1 - View
Utricularia gibba unitig_26.g10371 unitig_26 - View
Utricularia gibba unitig_22.g6430 unitig_22 + View
Vaccinium macrocarpon vmacro16230 Similar to At1g80170: Probable polygalacturonase At1g80170 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G3715 CM024069.1 + View