Gene: PGSC0003DMG400013516

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400013516
Transcript Identifier PGSC0003DMT400035162
Gene Type Coding gene
Location ST4.03ch05 : 8882619-8885705 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000037
#Genes/#Species 5045/97
Phylogenetic origin

ID ORTHO05D001500
#Genes/#Species 397/95
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37443780
id PGSC0003DMG400013516.v4.03
uniprot M1B1X0

Descriptions

Short descriptions
Ortholog descriptions

Description Polygalacturonase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005975	IEA	GOA Database	carbohydrate metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0008152	IEA	GOA Database	metabolic process
GO:0009827	ISO	PLAZA Integrative Orthology	plant-type cell wall modification	AT5G14650

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004650	IEA	GOA Database	polygalacturonase activity
GO:0004650	IEA	InterPro	polygalacturonase activity
GO:0016798	IEA	GOA Database	hydrolase activity, acting on glycosyl bonds
GO:0016787	IEA	GOA Database	hydrolase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005618	IEA	GOA Database	cell wall
GO:0009505	ISO	PLAZA Integrative Orthology	plant-type cell wall	AT5G14650

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012334	Pectin lyase fold
IPR000743	Glycoside hydrolase, family 28
IPR011050	Pectin lyase fold/virulence factor
IPR006626	Parallel beta-helix repeat

Mapman id	Description
50.3.2	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase