Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.3280 chr2 - View
Actinidia chinensis Actinidia09911 Lachesis_group5 + View
Actinidia chinensis Actinidia35330 Lachesis_group2 - View
Arabidopsis lyrata AL3G34360 scaffold_3 + View
Avicennia marina MSTRG.12966 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.14430 ScioBoG_18782_HRSCAF_18867 - View
Arabidopsis thaliana AT3G20540 polymerase gamma 1 Encodes an organellar DNA polymerase I that is also involved in double strand break repair. polymerase gamma 1 (POLGAMMA1)%3B FUNCTIONS IN: 3'-5' exonuclease activity%2C DNA binding%2C DNA-directed DNA polymerase activity%2C nucleic acid binding%3B INVOLVED IN: DNA replication%2C nucleobase%2C nucleoside%2C nucleotide and nucleic acid metabolic process%3B LOCATED IN: mitochondrion%2C chloroplast%2C nucleoid%3B EXPRESSED IN: male gametophyte%3B EXPRESSED DURING: M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: DNA-directed DNA polymerase%2C family A%2C palm domain (InterPro:IPR001098)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C DNA polymerase A domain (InterPro:IPR002298)%2C 3%26apos%3B-5%26apos%3B exonuclease (InterPro:IPR002562)%3B BEST Arabidopsis thaliana protein match is: polymerase gamma 2 (TAIR:AT1G50840.1)%3B Has 12537 Blast hits to 10327 proteins in 2621 species: Archae - 0%3B Bacteria - 7030%3B Metazoa - 148%3B Fungi - 0%3B Plants - 126%3B Viruses - 345%3B Other Eukaryotes - 4888 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G50840 polymerase gamma 2 DNA Polymerase gamma2. Dual targeting to mitochondria and plastids due to alternative translation initiation. polymerase gamma 2 (POLGAMMA2)%3B FUNCTIONS IN: DNA binding%2C DNA-directed DNA polymerase activity%3B INVOLVED IN: DNA replication%2C nucleobase%2C nucleoside%2C nucleotide and nucleic acid metabolic process%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-directed DNA polymerase%2C family A%2C palm domain (InterPro:IPR001098)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C DNA polymerase A domain (InterPro:IPR002298)%2C 3'-5' exonuclease (InterPro:IPR002562)%3B BEST Arabidopsis thaliana protein match is: polymerase gamma 1 (TAIR:AT3G20540.1)%3B Has 11974 Blast hits to 10011 proteins in 2572 species: Archae - 0%3B Bacteria - 6712%3B Metazoa - 149%3B Fungi - 0%3B Plants - 122%3B Viruses - 286%3B Other Eukaryotes - 4705 (source: NCBI BLink). Chr1 + View
Brassica napus C05p43810 C05 - View
Brassica napus A05p28320 A05 - View
Brassica rapa BraA05t21714Z A05 - View
Camellia sinensis var. sinensis CSS0002581 unnamed protein product [Coffea canephora] Chr7 + View
Camellia sinensis var. sinensis CSS0045288 PREDICTED: DNA polymerase I A, chloroplastic/mitochondrial [Nelumbo nucifera] Contig13 - View
Capsicum annuum CAN.G337.107 PGAv.1.6.scaffold337 - View
Corylus avellana Haze_09649 Similar to POLIA: DNA polymerase I A, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g13530 polymerase gamma 2 chr5 - View
Citrus clementina Ciclev10007282m.g scaffold_1 - View
Ceratophyllum demersum CDE05G0870 3 + View
Ceratophyllum demersum CDE01G0619 11 - View
Carpinus fangiana Cfa020382 Cfa08 + View
Cardamine hirsuta CARHR096300 Similarity to DNA polymerase I Chr3 + View
Cardamine hirsuta CARHR040890 DNA polymerase A family protein, putative Chr1 + View
Carya illinoinensis CiPaw.11G187400 PTHR10133//PTHR10133:SF34 - DNA POLYMERASE I // SUBFAMILY NOT NAMED Chr11 - View
Carya illinoinensis CiPaw.12G128200 K02335 - DNA polymerase I (DPO1, polA) Chr12 - View
Citrullus lanatus ClCG10G005550 DNA polymerase I, putative CG_Chr10 + View
Corchorus olitorius COL.COLO4_09635 hypothetical protein AWUE01014255.1 - View
Carica papaya Cpa.g.sc97.33 supercontig_97 + View
Capsella rubella Carub.0001s3979 K02335 - DNA polymerase I (DPO1, polA) scaffold_1 + View
Capsella rubella Carub.0003s2050 K02335 - DNA polymerase I (DPO1, polA) scaffold_3 + View
Daucus carota DCAR_022553 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv40737 GWHABJS00000013 + View
Durio zibethinus Duzib213G0065 NW_019167993.1 + View
Durio zibethinus Duzib170G0320 NW_019167871.1 + View
Erigeron canadensis ECA246G3119 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.F00930 Chr06 + View
Erythranthe guttata Migut.H01840 scaffold_8 + View
Eutrema salsugineum Thhalv10019969m.g K02335 - DNA polymerase I (DPO1, polA) scaffold_13 - View
Fragaria x ananassa FAN16G3453 K02335 - DNA polymerase I (DPO1, polA) Fvb3-3 - View
Fragaria x ananassa FAN25G2336 PTHR10133//PTHR10133:SF34 - DNA POLYMERASE I // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN21G1173 K02335 - DNA polymerase I (DPO1, polA) Fvb3-2 - View
Fragaria vesca FvH4_3g22230 K02335 - DNA polymerase I (DPO1, polA) Fvb3 - View
Gossypium hirsutum Gohir.D01G065200 K02335 - DNA polymerase I (DPO1, polA) D01 - View
Gossypium hirsutum Gohir.A01G078100 K02335 - DNA polymerase I (DPO1, polA) A01 - View
Gossypium raimondii Gorai.002G086900 Chr02 - View
Helianthus annuus HanXRQChr05g0159091 Putative DNA-directed DNA-polymerase, family A, mitochondria; DNA polymerase A HanXRQChr05 + View
Hydrangea macrophylla Hma1.2p1_0938F.1_g239220 Hma1.2p1_0938F.1 - View
Lotus japonicus Lj6g0019529 K02335 - DNA polymerase I (DPO1, polA) chr6 - View
Lonicera japonica Lj8A168T100 GWHAAZE00000008 - View
Lonicera japonica Lj1C869T19 GWHAAZE00000001 - View
Magnolia biondii MBI02_g28334_MAGBIO AED:0.04 Chr02 - View
Malus domestica MD11G1221900 polymerase gamma 2 Chr11 + View
Nelumbo nucifera Nn1g07107 chr1 - View
Nelumbo nucifera Nn1g03580 chr1 + View
Nicotiana tabacum Nitab4.5_0000397g0350 DNA-directed DNA polymerase, family A, palm domain, Ribonuclease H-like domain, 3'-5' exonuclease domain, DNA polymerase A Nitab4.5_0000397 - View
Olea europaea Oeu062600.1 chr7 - View
Olea europaea Oeu042923.1 chr11 - View
Petunia axillaris Peaxi162Scf00450g00842 DNA polymerase I Peaxi162Scf00450 + View
Punica granatum PGR083G0390 NC_045133.1 + View
Prunus persica Prupe.4G209500 K02335 - DNA polymerase I (DPO1, polA) Pp04 - View
Papaver somniferum PSO675G7850 NC_039358.1 - View
Papaver somniferum PSO541G1561 NC_039363.1 - View
Populus trichocarpa Potri.011G136900 K02335 - DNA polymerase I (DPO1, polA) Chr11 - View
Populus trichocarpa Potri.001G421300 K02335 - DNA polymerase I (DPO1, polA) Chr01 - View
Phaseolus vulgaris Phvul.006G039400 K02335 - DNA polymerase I (DPO1, polA) Chr06 + View
Quercus lobata QL08p011843 8 + View
Salix brachista Sabra16G0286100 GWHAAZH00000016 - View
Salix brachista Sabra11G0122800 GWHAAZH00000011 - View
Solanum lycopersicum Solyc07g064330.3 DNA polymerase (AHRD V3.3 *** Q3LHT0_TOBAC) SL4.0ch07 - View
Schrenkiella parvula Sp3g18540 K02335 - DNA polymerase I (DPO1, polA) ch3-1 + View
Schrenkiella parvula Sp1g37600 K02335 - DNA polymerase I (DPO1, polA) ch1-2 + View
Solanum pennellii Sopen07g032480 polymerase gamma 1 (POLGAMMA1) | FUNCTIONS IN: 3-5 exonuclease activity, DNA-directed DNA polymerase activity, DNA binding, nucleic acid binding | INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: male gametophyte | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , DNA-directed DNA polymerase, family A, palm domain , DNA polymerase A domain , 3-5 exonuclease | BEST Arabidopsis thaliana protein match is: polymerase gamma 2 ., DNA-directed DNA polymerase, family A, palm domain Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG402013919 DNA polymerase ST4.03ch07 - View
Trochodendron aralioides TAR626G0790 group3 + View
Theobroma cacao Thecc.07G043600 Polymerase gamma 2 Chromosome_7 + View
Tarenaya hassleriana THA.LOC104817879 DNA polymerase I A%2C chloroplastic/mitochondrial NW_010966021.1 + View
Trifolium pratense TPR.G16585 Tp57577_TGAC_v2_scaf_266 + View
Tripterygium wilfordii TWI38G0810 NC_052252.1 + View
Vaccinium macrocarpon vmacro11739 Similar to POLIA: DNA polymerase I A, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro09733 Similar to POLIB: DNA polymerase I B, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View