Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold153G37001 scaffold153 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G26850 LG-1 - View
Aethionema arabicum Aa31LG10G15020 LG-10 - View
Acer truncatum Atru.chr5.295 chr5 - View
Actinidia chinensis Actinidia31400 Lachesis_group0 - View
Actinidia chinensis Actinidia33473 Lachesis_group16 - View
Arabidopsis lyrata AL5G43070 scaffold_5 - View
Avicennia marina MSTRG.20744 ScioBoG_26180_HRSCAF_26306 - View
Avicennia marina MSTRG.8808 ScioBoG_11560_HRSCAF_11609 + View
Avicennia marina MSTRG.27180 ScioBoG_8578_HRSCAF_8617 + View
Avicennia marina MSTRG.17179 ScioBoG_19743_HRSCAF_19834 + View
Aquilegia oxysepala Aqoxy5G03940 CHR05 + View
Arabidopsis thaliana AT3G60770 Ribosomal protein S13/S15 Ribosomal protein S13/S15%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C nucleolus%2C cell wall%2C chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15%2C N-terminal (InterPro:IPR012606)%2C Ribosomal protein S15 (InterPro:IPR000589)%2C S15/NS1%2C RNA-binding (InterPro:IPR009068)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein S13A (TAIR:AT4G00100.1)%3B Has 1099 Blast hits to 1099 proteins in 415 species: Archae - 259%3B Bacteria - 0%3B Metazoa - 342%3B Fungi - 146%3B Plants - 139%3B Viruses - 0%3B Other Eukaryotes - 213 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC02g10177 ChrC02 - View
Brassica napus A04p33750 A04 - View
Brassica napus A05p05330 A05 - View
Brassica napus A04p01450 A04 + View
Brassica oleracea BolC4t28654H C4 - View
Brassica rapa BraA04t15863Z A04 + View
Brassica rapa BraA04t18837Z A04 - View
Brassica rapa BraA05t19502Z A05 - View
Camellia sinensis var. sinensis CSS0035508 PREDICTED: 40S ribosomal protein S13-like [Sesamum indicum] Chr3 + View
Cicer arietinum L. Ca_19961_v3 Ca_LG6_v3 - View
Corylus avellana Haze_16799 Similar to RPS13: 40S ribosomal protein S13 (Glycine max OX%3D3847) 11 - View
Citrus clementina Ciclev10022677m.g scaffold_3 + View
Cardamine hirsuta CARHR171160 40S ribosomal protein S13 Chr5 - View
Carya illinoinensis CiPaw.01G262900 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) Chr01 + View
Citrullus lanatus ClCG06G000430 40S ribosomal protein S13, putative CG_Chr06 + View
Cucumis melo MELO3C022497.2 40S ribosomal protein S13 chr11 - View
Corchorus olitorius COL.COLO4_12532 Ribosomal protein S15 AWUE01014928.1 - View
Capsella rubella Carub.0005s2752 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) scaffold_5 - View
Cucumis sativus L. CsaV3_6G006230 40S ribosomal protein S13 chr6 + View
Daucus carota DCAR_008557 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_031522 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv43699 GWHABJS00000016 - View
Durio zibethinus Duzib133G1324 NW_019167938.1 - View
Durio zibethinus Duzib205G1873 NW_019168381.1 + View
Durio zibethinus Duzib138G1024 NW_019167893.1 - View
Erigeron canadensis ECA236G4453 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.D02461 Chr04 + View
Erythranthe guttata Migut.B01624 scaffold_2 + View
Eutrema salsugineum Thhalv10001670m.g K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) scaffold_22 - View
Eutrema salsugineum Thhalv10006293m.g K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) scaffold_19 - View
Fragaria x ananassa FAN10G1148 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) Fvb7-1 - View
Gossypium hirsutum Gohir.D08G156100 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) D08 + View
Gossypium hirsutum Gohir.A08G135100 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) A08 + View
Gossypium hirsutum Gohir.A12G264400 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) A12 + View
Gossypium hirsutum Gohir.D07G152200 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) D07 + View
Gossypium hirsutum Gohir.A11G080300 KOG0400 - 40S ribosomal protein S13 A11 + View
Gossypium hirsutum Gohir.A07G146100 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) A07 + View
Gossypium raimondii Gorai.001G174200 Chr01 + View
Gossypium raimondii Gorai.007G090600 Chr07 + View
Gossypium raimondii Gorai.004G162400 Chr04 + View
Lupinus albus Lalb_Chr05g0225421 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) Lalb_Chr05 + View
Lotus japonicus Lj3g0020576 PF00312//PF01535//PF08069//PF13041 - Ribosomal protein S15 (Ribosomal_S15) // PPR repeat (PPR) // Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N) // PPR repeat family (PPR_2) chr3 - View
Lonicera japonica Lj7A530T82 GWHAAZE00000007 + View
Lonicera japonica Lj9P568T58 GWHAAZE00000009 - View
Malus domestica MD07G1120500 ribosomal protein S13A Chr07 - View
Manihot esculenta Manes.05G046600 Chromosome05 + View
Nicotiana tabacum Nitab4.5_0003912g0090 Ribosomal protein S15, Ribosomal protein S13/S15, N-terminal, S15/NS1, RNA-binding Nitab4.5_0003912 - View
Olea europaea Oeu037920.1 chr15 - View
Olea europaea Oeu005790.1 chr3 - View
Petunia axillaris Peaxi162Scf00959g00219 Unknown protein Peaxi162Scf00959 - View
Prunus persica Prupe.2G144200 Pp02 + View
Populus trichocarpa Potri.002G146800 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) Chr02 + View
Populus trichocarpa Potri.014G068600 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) Chr14 - View
Quercus lobata QL08p052659 8 + View
Rhododendron simsii Rhsim07G0028300 chr07 - View
Salvia bowleyana SalBow5G1326 GWHASIU00000003 - View
Salix brachista Sabra14G0048300 GWHAAZH00000014 - View
Salix brachista Sabra02G0114400 GWHAAZH00000002 - View
Simmondsia chinensis Sc23g0003600 GWHAASQ00000023 + View
Sechium edule Sed0023611 LG09 + View
Sechium edule Sed0004840 LG04 - View
Sechium edule Sed0024697 LG05 + View
Sechium edule Sed0015520 LG01 + View
Solanum lycopersicum Solyc10g018250.2 40S ribosomal protein S13 (AHRD V3.3 *** A0A2I0WN36_9ASPA) SL4.0ch10 + View
Solanum lycopersicum Solyc01g091220.3 40S ribosomal protein S13 (AHRD V3.3 *** A0A2I0WN36_9ASPA) SL4.0ch01 - View
Schrenkiella parvula Sp4g27370 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) ch4-6 - View
Schrenkiella parvula Sp5g02480 K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) ch5-1 + View
Solanum pennellii Sopen05g029470 40S ribosomal protein S13 - Glycine max (Soybean), Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development | ribosomal protein S13A (RPS13A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation | LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal , Ribosomal protein S15 , S15/NS1, RNA-binding | BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 Spenn-ch05 - View
Solanum pennellii Sopen01g036970 40S ribosomal protein S13 - Glycine max (Soybean), Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development | ribosomal protein S13A (RPS13A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation | LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal , Ribosomal protein S15 , S15/NS1, RNA-binding | BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 Spenn-ch01 - View
Solanum pennellii Sopen10g007480 40S ribosomal protein S13 - Glycine max (Soybean), Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development | ribosomal protein S13A (RPS13A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation | LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal , Ribosomal protein S15 , S15/NS1, RNA-binding | BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 Spenn-ch10 + View
Trochodendron aralioides TAR374G1550 group12 - View
Theobroma cacao Thecc.01G378000 Ribosomal protein S13A Chromosome_1 + View
Theobroma cacao Thecc.03G261500 Ribosomal protein S13A Chromosome_3 + View
Tarenaya hassleriana THA.LOC104801477 40S ribosomal protein S13-1-like NW_010969548.1 - View
Tarenaya hassleriana THA.LOC104817243 40S ribosomal protein S13-1-like NW_010965946.1 - View
Utricularia gibba unitig_8.g3824 unitig_8 - View
Utricularia gibba unitig_22.g5381 unitig_22 - View
Vaccinium macrocarpon vmacro21017 Similar to RPS13: 40S ribosomal protein S13 (Glycine max OX%3D3847) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13409 Similar to RPS13: 40S ribosomal protein S13 (Glycine max OX%3D3847) chr7_Vaccinium_macrocarpon_Stevens_v1 - View