Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold205G41733 scaffold205 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G10820 LG-4 - View
Aethionema arabicum Aa31LG7G7960 LG-7 - View
Aethionema arabicum Aa31LG2G10330 LG-2 - View
Acer truncatum Atru.chr11.1925 chr11 + View
Actinidia chinensis Actinidia37689 Lachesis_group13 + View
Arabidopsis lyrata AL2G16860 scaffold_2 - View
Arabidopsis lyrata AL2G29270 scaffold_2 + View
Avicennia marina MSTRG.7851 ScioBoG_102841_HRSCAF_103114 + View
Amaranthus hybridus Ah.03g132080 AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IC2T98 K11644 - paired amphipathic helix protein Sin3a (SIN3A) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G70030 Paired amphipathic helix (PAH2) superfamily protein Paired amphipathic helix (PAH2) superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822)%3B BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1)%3B Has 1404 Blast hits to 650 proteins in 168 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 539%3B Fungi - 520%3B Plants - 290%3B Viruses - 0%3B Other Eukaryotes - 55 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G59890 SIN3-like 5 SIN3-like 5 (SNL5)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194)%2C Paired amphipathic helix (InterPro:IPR003822)%3B BEST Arabidopsis thaliana protein match is: SIN3-like 6 (TAIR:AT1G10450.1)%3B Has 2059 Blast hits to 826 proteins in 195 species: Archae - 0%3B Bacteria - 5%3B Metazoa - 811%3B Fungi - 648%3B Plants - 432%3B Viruses - 0%3B Other Eukaryotes - 163 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB07g31188 ChrB07 + View
Brassica carinata BcaC08g46454 ChrC08 + View
Brassica carinata BcaB03g15528 ChrB03 + View
Brassica carinata BcaC05g24928 ChrC05 + View
Brassica carinata BcaC05g24883 ChrC05 - View
Brassica carinata BcaC04g22197 ChrC04 + View
Brassica carinata BcaC08g45844 ChrC08 - View
Brassica carinata BcaC03g15153 ChrC03 + View
Brassica napus A06p07090 A06 + View
Brassica napus A07p31240 A07 - View
Brassica napus C05p08580 C05 + View
Brassica napus C06p43890 C06 + View
Brassica napus A07p36470 A07 + View
Brassica napus A09p17860 A09 - View
Brassica napus C06p36350 C06 - View
Brassica oleracea BolC5t31041H C5 - View
Brassica oleracea BolC6t38755H C6 - View
Brassica oleracea BolC5t29610H C5 + View
Brassica oleracea BolC6t39461H C6 + View
Brassica oleracea BolC9t55134H C9 - View
Brassica rapa BraA09t39561Z A09 + View
Brassica rapa BraA07t31218Z A07 + View
Brassica rapa BraA06t23924Z A06 + View
Brassica rapa BraA09t37419Z A09 - View
Capsicum annuum CAN.G206.73 PGAv.1.6.scaffold206 - View
Cicer arietinum L. Ca_04238_v3 Ca_LG2_v3 - View
Corylus avellana Haze_12115 Similar to SNL4: Paired amphipathic helix protein Sin3-like 4 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g13980 Paired amphipathic helix protein Sin3-like 3 chr11 + View
Citrus clementina Ciclev10030507m.g scaffold_4 - View
Cardamine hirsuta CARHR024570 Paired amphipathic helix protein Sin3-like 3 Chr1 - View
Cardamine hirsuta CARHR063110 Paired amphipathic helix protein Sin3-like 3 Chr2 + View
Cardamine hirsuta CARHR010590 Paired amphipathic helix protein Sin3-like 6 Chr1 + View
Citrullus lanatus ClCG05G024900 Paired amphipathic helix protein Sin3 CG_Chr05 + View
Cucumis melo MELO3C012036.2 Paired amphipathic helix SIN3-like protein chr10 + View
Chenopodium quinoa AUR62026526 SNL4: Paired amphipathic helix protein Sin3-like 4 C_Quinoa_Scaffold_4244 - View
Capsella rubella Carub.0002s1671 KOG4204 - Histone deacetylase complex, SIN3 component scaffold_2 + View
Capsella rubella Carub.0002s0538 K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_2 - View
Capsella rubella Carub.0001s0989 K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_1 + View
Cucumis sativus L. CsaV3_5G032000 Paired amphipathic helix protein Sin3-like chr5 - View
Daucus carota DCAR_026572 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_007116 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv24925 GWHABJS00000018 - View
Davidia involucrata Dinv31135 GWHABJS00000008 + View
Davidia involucrata Dinv13124 GWHABJS00000006 + View
Durio zibethinus Duzib264G1131 NW_019167960.1 - View
Durio zibethinus Duzib251G0389 NW_019167971.1 + View
Durio zibethinus Duzib268G1764 NW_019168270.1 + View
Durio zibethinus Duzib248G1530 NW_019168048.1 - View
Erigeron canadensis ECA246G4457 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.B03381 Chr02 + View
Erythranthe guttata Migut.L01376 scaffold_12 + View
Eutrema salsugineum Thhalv10009361m.g PTHR12346 - SIN3B-RELATED scaffold_5 + View
Eutrema salsugineum Thhalv10006620m.g K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_5 - View
Eutrema salsugineum Thhalv10023225m.g K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_8 - View
Eutrema salsugineum Thhalv10018014m.g K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_9 - View
Fragaria x ananassa FAN12G3339 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4-3 + View
Fragaria x ananassa FAN17G1325 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4-2 + View
Fragaria x ananassa FAN22G2288 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4-1 - View
Fragaria vesca FvH4_4g35300 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4 - View
Gossypium hirsutum Gohir.A03G144200 K11644 - paired amphipathic helix protein Sin3a (SIN3A) A03 - View
Gossypium hirsutum Gohir.D02G167400 K11644 - paired amphipathic helix protein Sin3a (SIN3A) D02 - View
Gossypium hirsutum Gohir.A05G362400 K11644 - paired amphipathic helix protein Sin3a (SIN3A) A05 - View
Glycine max Glyma.08G292900 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Gm08 - View
Glycine max Glyma.02G026700 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Gm02 + View
Glycine max Glyma.01G038250 PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED Gm01 - View
Glycine max Glyma.18G130300 PTHR12346 - SIN3B-RELATED Gm18 + View
Gossypium raimondii Gorai.005G187800 Chr05 - View
Helianthus annuus HanXRQChr17g0570321 Putative histone deacetylase interacting domain; Sin3, C-terminal HanXRQChr17 - View
Lupinus albus Lalb_Chr05g0217341 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0382591 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Lalb_Chr16 - View
Lonicera japonica Lj3A1046T48 GWHAAZE00000003 + View
Lonicera japonica Lj6C798G9 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_3_49260 Lsat_1_v8_lg_3 - View
Malus domestica MD16G1083700 SIN3-like 4 Chr16 + View
Malus domestica MD13G1084700 SIN3-like 4 Chr13 + View
Manihot esculenta Manes.01G194400 Chromosome01 + View
Manihot esculenta Manes.05G093400 Chromosome05 - View
Prunus persica Prupe.1G262300 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Pp01 - View
Pisum sativum Psat2g112960 Paired amphipathic helix repeat chr2LG1 - View
Phaseolus vulgaris Phvul.003G056400 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr03 - View
Phaseolus vulgaris Phvul.004G022900 Chr04 - View
Phaseolus vulgaris Phvul.002G077800 Chr02 - View
Rosa chinensis RcHm_v2.0_Chr4g0444901 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0126800 chr12 - View
Salvia bowleyana SalBow2G0101 GWHASIU00000007 - View
Simmondsia chinensis Sc11g0001520 GWHAASQ00000011 + View
Sechium edule Sed0005931 LG04 - View
Sechium edule Sed0017791 LG06 + View
Solanum lycopersicum Solyc02g087360.4 Paired amphipathic helix protein Sin3-like 1 (AHRD V3.3 *** A0A1U8G0F5_CAPAN) SL4.0ch02 - View
Solanum lycopersicum Solyc05g006540.3 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G2YE30_CAPAN) SL4.0ch05 - View
Schrenkiella parvula Sp1g09080 K11644 - paired amphipathic helix protein Sin3a (SIN3A) ch1-1 + View
Schrenkiella parvula Sp5g25130 PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED ch5-6 + View
Schrenkiella parvula Sp2g04710 K11644 - paired amphipathic helix protein Sin3a (SIN3A) ch2-2 - View
Schrenkiella parvula Sp1g21550 PF02671 - Paired amphipathic helix repeat (PAH) ch1-1 - View
Solanum pennellii Sopen02g032110 Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). | SIN3-like 2 (SNL2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting , Paired amphipathic helix | BEST Arabidopsis thaliana protein match is: SIN3-like 1 ., Histone deacetylase interacting Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400022606 WRKY domain class transcription factor ST4.03ch05 + View
Trochodendron aralioides TAR629G1864 group0 + View
Trochodendron aralioides TAR622G0057 group8 + View
Theobroma cacao Thecc.02G238600 WRKY domain class transcription factor Chromosome_2 + View
Tarenaya hassleriana THA.LOC104808829 paired amphipathic helix protein Sin3-like 3 isoform X1 NW_010960187.1 + View
Tripterygium wilfordii TWI75G0044 NC_052253.1 - View
Vaccinium macrocarpon vmacro16299 Similar to SNL3: Paired amphipathic helix protein Sin3-like 3 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro19347 Similar to SNL1: Paired amphipathic helix protein Sin3-like 1 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G0760 CM024069.1 + View
Vitis vinifera GSVIVG01020136001 chr1 - View