Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G7610 LG-9 - View
Actinidia chinensis Actinidia01263 Lachesis_group18 + View
Actinidia chinensis Actinidia32775 Lachesis_group14 - View
Arabidopsis lyrata AL8G13410 scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WLNU9H PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.379I7Q PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT5G45390 CLP protease P4 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). CLP protease P4 (CLPP4)%3B FUNCTIONS IN: serine-type endopeptidase activity%3B INVOLVED IN: chloroplast organization%2C regulation of timing of transition from vegetative to reproductive phase%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S14%2C ClpP%2C active site (InterPro:IPR018215)%2C Peptidase S14%2C ClpP (InterPro:IPR001907)%3B BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0829G127 AmTr_v1.0_scaffold00048 + View
Brassica carinata BcaB07g30457 ChrB07 - View
Brassica carinata BcaC06g31553 ChrC06 - View
Brassica carinata BcaC06g34434 ChrC06 - View
Brassica napus C07p28500 C07 + View
Brassica oleracea BolC7t43390H C7 + View
Brassica rapa BraA09t37780Z A09 + View
Brassica rapa BraA06t27535Z A06 - View
Camellia sinensis var. sinensis CSS0023075 PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic, partial [Eucalyptus grandis] Contig930 - View
Cicer arietinum L. Ca_25101_v3 Ca_LG8_v3 + View
Corylus avellana Haze_08065 Similar to CLPP4: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic (Arabidopsis thaliana OX%3D3702) 4 + View
Carpinus fangiana Cfa012592 Cfa05 - View
Cardamine hirsuta CARHR176680 ATP-dependent Clp protease proteolytic subunit Chr6 - View
Carya illinoinensis CiPaw.11G103300 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr11 - View
Citrullus lanatus ClCG10G001000 ATP-dependent Clp protease proteolytic subunit CG_Chr10 + View
Cucumis melo MELO3C013793.2 ATP-dependent Clp protease proteolytic subunit chr06 + View
Capsella rubella Carub.0008s0272 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED scaffold_8 - View
Cucumis sativus L. CsaV3_3G001040 ATP-dependent Clp protease proteolytic subunit chr3 + View
Daucus carota DCAR_004238 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_008176 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv22875 GWHABJS00000017 - View
Erythranthe guttata Migut.E01350 scaffold_5 - View
Eutrema salsugineum Thhalv10000978m.g PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED scaffold_20 + View
Glycine max Glyma.01G149700 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.09G213800 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Gm09 - View
Lupinus albus Lalb_Chr16g0380731 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Lalb_Chr16 + View
Lotus japonicus Lj2g0004897 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED chr2 + View
Lonicera japonica Lj7A143G22 GWHAAZE00000007 + View
Magnolia biondii MBI04_g27278_MAGBIO AED:0.42 Chr04 - View
Manihot esculenta Manes.17G003300 Chromosome17 - View
Medicago truncatula Medtr5g026840 ATP-dependent Clp protease proteolytic protein chr5 + View
Nicotiana tabacum Nitab4.5_0000030g0100 ClpP, active site, Clp protease proteolytic subunit /Translocation-enhancing protein TepA, ClpP Nitab4.5_0000030 - View
Punica granatum PGR031G1526 NC_045127.1 - View
Pisum sativum Psat2g142240 Clp protease chr2LG1 - View
Populus trichocarpa Potri.003G103300 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.002G128500 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED Chr02 + View
Quercus lobata QL12p001081 12 - View
Rhododendron simsii Rhsim11G0024800 chr11 + View
Salix brachista Sabra03G0070500 GWHAAZH00000003 - View
Sechium edule Sed0026890 LG04 - View
Solanum lycopersicum Solyc08g075750.4 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A2G3DD48_CAPCH) SL4.0ch08 + View
Schrenkiella parvula Sp2g10340 PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED ch2-4 + View
Solanum pennellii Sopen08g024400 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). | CLP protease P4 (CLPP4) | FUNCTIONS IN: serine-type endopeptidase activity | INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase | LOCATED IN: in 7 components | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site , Peptidase S14, ClpP | BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400030851 ATP-dependent Clp protease proteolytic subunit ST4.03ch08 + View
Trochodendron aralioides TAR375G0187 group15 + View
Tarenaya hassleriana THA.LOC104806193 ATP-dependent Clp protease proteolytic subunit 4%2C chloroplastic NW_010962392.1 - View
Trifolium pratense TPR.G17255 Tp57577_TGAC_v2_LG2 + View
Vaccinium macrocarpon vmacro00061 Similar to CLPP4: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1872 CM024074.1 + View
Zea mays Zm00001eb025310 Zm00001e002511 ATP-dependent Clp protease proteolytic subunit 1 - View