Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.2103 chr3 + View
Actinidia chinensis Actinidia16242 Lachesis_group24 - View
Actinidia chinensis Actinidia00904 Lachesis_group13 - View
Arabidopsis lyrata AL3G25400 scaffold_3 - View
Avicennia marina MSTRG.12798 ScioBoG_17730_HRSCAF_17811 + View
Arabidopsis thaliana AT3G13490 Lysyl-tRNA synthetase, class II Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. OVULE ABORTION 5 (OVA5)%3B FUNCTIONS IN: aminoacyl-tRNA ligase activity%2C nucleotide binding%2C ATP binding%2C nucleic acid binding%2C lysine-tRNA ligase activity%3B INVOLVED IN: tRNA aminoacylation for protein translation%2C ovule development%3B LOCATED IN: mitochondrion%2C chloroplast%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type (InterPro:IPR004365)%2C Aminoacyl-tRNA synthetase%2C class II%2C conserved domain (InterPro:IPR006195)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Aminoacyl-tRNA synthetase%2C class II (D/K/N) (InterPro:IPR004364)%2C Lysyl-tRNA synthetase%2C class II%2C C-terminal (InterPro:IPR018149)%2C Aminoacyl-tRNA synthetase%2C class II (D/K/N)-like (InterPro:IPR018150)%2C Lysyl-tRNA synthetase%2C class II (InterPro:IPR002313)%3B BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1)%3B Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404%3B Bacteria - 18954%3B Metazoa - 615%3B Fungi - 809%3B Plants - 266%3B Viruses - 0%3B Other Eukaryotes - 6441 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC05g29175 ChrC05 + View
Brassica napus A05p36040 A05 + View
Brassica napus A03p38240 A03 - View
Brassica oleracea BolC5t34105H C5 + View
Beta vulgaris EL10Ac4g10388 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0028494 PREDICTED: probable lysine--tRNA ligase, cytoplasmic [Malus domestica] Chr11 - View
Corylus avellana Haze_22937 Similar to OVA5: Lysine--tRNA ligase, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g00140 Lysine--tRNA ligase chr1 + View
Citrus clementina Ciclev10014735m.g scaffold_2 - View
Carpinus fangiana Cfa009558 Cfa04 - View
Cardamine hirsuta CARHR088160 Lysine--tRNA ligase Chr3 - View
Carya illinoinensis CiPaw.13G177500 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE Chr13 + View
Citrullus lanatus ClCG02G024400 Lysine--tRNA ligase CG_Chr02 + View
Cucumis melo MELO3C014727.2 Lysine--tRNA ligase chr05 - View
Carica papaya Cpa.g.sc119.38 supercontig_119 - View
Capsella rubella Carub.0003s1296 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE scaffold_3 - View
Cucumis sativus L. CsaV3_4G017540 Lysine--tRNA ligase chr4 + View
Davidia involucrata Dinv13475 GWHABJS00000007 + View
Eucalyptus grandis Eucgr.J01764 Chr10 - View
Erythranthe guttata Migut.N00550 scaffold_14 - View
Eutrema salsugineum Thhalv10020319m.g PTHR22594:SF20 - LYSINE--TRNA LIGASE scaffold_13 + View
Fragaria x ananassa FAN25G0602 K04567 - lysyl-tRNA synthetase, class II (KARS, lysS) Fvb3-1 - View
Fragaria x ananassa FAN16G2109 PTHR22594:SF20 - LYSINE--TRNA LIGASE Fvb3-3 + View
Fragaria x ananassa FAN11G2456 K04567 - lysyl-tRNA synthetase, class II (KARS, lysS) Fvb3-4 - View
Fragaria vesca FvH4_3g45770 K04567 - lysyl-tRNA synthetase, class II (KARS, lysS) Fvb3 + View
Gossypium hirsutum Gohir.A08G014800 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE A08 - View
Gossypium hirsutum Gohir.D08G025400 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE D08 - View
Gossypium raimondii Gorai.004G020700 Chr04 - View
Malus domestica MD11G1003100 Lysyl-tRNA synthetase Chr11 - View
Malus domestica MD03G1003300 Lysyl-tRNA synthetase Chr03 - View
Manihot esculenta Manes.03G087300 Chromosome03 - View
Nelumbo nucifera Nn2g15862 chr2 + View
Olea europaea Oeu004752.1 chr22 + View
Punica granatum PGR119G2138 NC_045132.1 - View
Prunus persica Prupe.6G002900 PTHR22594:SF20 - LYSINE--TRNA LIGASE Pp06 - View
Populus trichocarpa Potri.003G221600 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE Chr03 + View
Rosa chinensis RcHm_v2.0_Chr5g0083841 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0233000 chr13 + View
Salix brachista Sabra03G0164900 GWHAAZH00000003 + View
Simmondsia chinensis Sc09g0000050 GWHAASQ00000009 - View
Sechium edule Sed0020866 LG05 + View
Sechium edule Sed0027407 LG01 + View
Solanum lycopersicum Solyc01g005540.4 Lysine--tRNA ligase (AHRD V3.3 *** A0A1U8HGH5_CAPAN) SL4.0ch01 - View
Schrenkiella parvula Sp3g11700 PTHR22594:SF20 - LYSINE--TRNA LIGASE ch3-1 - View
Solanum pennellii Sopen01g001560 Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. | OVULE ABORTION 5 (OVA5) | FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity | INVOLVED IN: tRNA aminoacylation for protein translation, ovule development | LOCATED IN: mitochondrion, chloroplast, cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Nucleic acid binding, OB-fold, tRNA/helicase-type , Aminoacyl-tRNA synthetase, class II, conserved domain , Nucleic acid-binding, OB-fold-like , Aminoacyl-tRNA synthetase, class II (D/K/N) , Lysyl-tRNA synthetase, class II, C-terminal , Aminoacyl-tRNA synthetase, class II (D/K/N)-like , Lysyl-tRNA synthetase, class II | BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400032166 Lysyl-tRNA synthetase ST4.03ch01 - View
Trochodendron aralioides TAR633G1259 group2 - View
Vitis vinifera GSVIVG01025473001 chr6 - View